Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm23589-201ENSMUST00000157660 105 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm25450-201ENSMUST00000179144 107 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm18357-201ENSMUST00000188184 580 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm42594-201ENSMUST00000199511 246 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm44473-201ENSMUST00000204039 152 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm25636-201ENSMUST00000082666 133 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm24805-201ENSMUST00000082931 104 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm23970-201ENSMUST00000083319 107 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Mir340-201ENSMUST00000083483 98 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.32□□□□□ -2.2
Ebf4Q8K4J2 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm22761-201ENSMUST00000102278 96 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Mir301b-201ENSMUST00000102333 97 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm14001-201ENSMUST00000118847 247 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm11794-201ENSMUST00000119446 237 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm13992-201ENSMUST00000120558 156 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm14215-201ENSMUST00000120578 221 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm25805-201ENSMUST00000122788 108 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm22598-201ENSMUST00000157600 127 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm24837-201ENSMUST00000158683 81 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm20613-201ENSMUST00000175828 345 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm25933-201ENSMUST00000178943 108 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm20923-201ENSMUST00000190009 319 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm29140-201ENSMUST00000190187 476 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm21088-201ENSMUST00000190875 316 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm29490-201ENSMUST00000190923 342 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm36891-201ENSMUST00000191995 655 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Mir3087-201ENSMUST00000199405 56 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm42807-201ENSMUST00000200141 329 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Mir7227-201ENSMUST00000200408 59 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm44909-201ENSMUST00000208756 165 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm25589-201ENSMUST00000082502 166 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm24460-201ENSMUST00000082731 106 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm23462-201ENSMUST00000083264 104 ntBASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Ebf4Q8K4J2 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm15010-201ENSMUST00000117153 407 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm13885-201ENSMUST00000117569 187 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm12351-201ENSMUST00000118727 292 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm23232-201ENSMUST00000157300 105 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm24262-201ENSMUST00000157431 144 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm23558-201ENSMUST00000157823 80 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm22447-201ENSMUST00000158155 92 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm25956-201ENSMUST00000175115 217 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm23355-201ENSMUST00000177614 107 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm23148-201ENSMUST00000180367 107 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm27878-201ENSMUST00000184000 106 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Mir6905-201ENSMUST00000184228 70 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm21064-202ENSMUST00000190583 278 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm28288-201ENSMUST00000191019 214 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm37713-201ENSMUST00000191746 198 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm37338-201ENSMUST00000191986 127 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm36946-201ENSMUST00000192706 435 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm23055-201ENSMUST00000082805 94 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm22571-201ENSMUST00000082984 70 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm25258-201ENSMUST00000083049 107 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.3□□□□□ -2.2
Ebf4Q8K4J2 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Mir875-201ENSMUST00000104698 78 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm13725-201ENSMUST00000122139 207 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm24896-201ENSMUST00000122741 135 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm22217-201ENSMUST00000157556 313 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm22551-201ENSMUST00000157795 103 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm19901-201ENSMUST00000192191 495 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm18433-201ENSMUST00000192747 197 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm44482-201ENSMUST00000199232 103 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm44055-201ENSMUST00000204376 247 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm44655-201ENSMUST00000207768 423 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm22062-201ENSMUST00000082563 107 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Gm24355-201ENSMUST00000082858 122 ntBASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Ebf4Q8K4J2 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms