| Cdkl1 | Q8CEQ0 | Gm45815-201 | ENSMUST00000220241 | 146 nt | BASIC | 0.05 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm39473-201 | ENSMUST00000223498 | 522 nt | TSL 3 BASIC | 0.05 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | AC124569.4-201 | ENSMUST00000223830 | 1220 nt | BASIC | 0.05 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | 2210407C18Rik-201 | ENSMUST00000048801 | 876 nt | APPRIS P1 TSL 1 (best) BASIC | 0.05 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm22508-201 | ENSMUST00000082772 | 110 nt | BASIC | 0.05 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm22575-201 | ENSMUST00000082981 | 110 nt | BASIC | 0.05 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm4746-201 | ENSMUST00000120395 | 2406 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm14568-201 | ENSMUST00000119321 | 294 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm11794-201 | ENSMUST00000119446 | 237 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Scarna8-201 | ENSMUST00000158333 | 131 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm25750-201 | ENSMUST00000175483 | 112 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm20689-201 | ENSMUST00000176033 | 279 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm22584-201 | ENSMUST00000177935 | 92 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm28661-201 | ENSMUST00000188231 | 681 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm38231-201 | ENSMUST00000192030 | 347 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm43556-201 | ENSMUST00000196186 | 681 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | AC163033.1-201 | ENSMUST00000218608 | 157 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | AC167229.1-201 | ENSMUST00000220057 | 469 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | CT485612.2-201 | ENSMUST00000223014 | 151 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | mt-Nd2-201 | ENSMUST00000082396 | 1038 nt | APPRIS P1 BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Mir32-201 | ENSMUST00000083610 | 70 nt | BASIC | 0.04 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm14931-201 | ENSMUST00000111079 | 253 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm24833-201 | ENSMUST00000116775 | 120 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm23000-201 | ENSMUST00000157083 | 139 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm22340-201 | ENSMUST00000157717 | 114 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm25384-201 | ENSMUST00000157807 | 105 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm25643-201 | ENSMUST00000158874 | 103 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Eif3s6-ps2-201 | ENSMUST00000163304 | 219 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm25253-201 | ENSMUST00000179958 | 107 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm27365-201 | ENSMUST00000184041 | 177 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm38208-201 | ENSMUST00000192476 | 114 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm42805-201 | ENSMUST00000196158 | 276 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm42164-201 | ENSMUST00000198881 | 379 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm44488-201 | ENSMUST00000199467 | 119 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm43993-201 | ENSMUST00000203972 | 247 nt | BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm6358-201 | ENSMUST00000089101 | 156 nt | APPRIS ALT2 BASIC | 0.03 | □□□□□ -2.4 | | |
| Cdkl1 | Q8CEQ0 | Gm23422-201 | ENSMUST00000102000 | 107 nt | BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm29247-202 | ENSMUST00000148542 | 571 nt | TSL 2 BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm26278-201 | ENSMUST00000157098 | 132 nt | BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm22597-201 | ENSMUST00000157602 | 80 nt | BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm25952-201 | ENSMUST00000175329 | 74 nt | BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm24897-201 | ENSMUST00000179033 | 107 nt | BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm43513-201 | ENSMUST00000199779 | 1076 nt | BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm45541-201 | ENSMUST00000210443 | 54 nt | BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Rpl31-ps2-201 | ENSMUST00000223231 | 343 nt | BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm23503-201 | ENSMUST00000083903 | 107 nt | BASIC | 0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Mir466n-201 | ENSMUST00000104798 | 94 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm12779-201 | ENSMUST00000121496 | 143 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm24726-201 | ENSMUST00000158232 | 121 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm22088-201 | ENSMUST00000158341 | 117 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Mir1936-201 | ENSMUST00000158699 | 93 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm25161-201 | ENSMUST00000158913 | 132 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Mir3108-201 | ENSMUST00000175500 | 79 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm24518-201 | ENSMUST00000180275 | 94 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Mir703-201 | ENSMUST00000197105 | 109 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Mir468-201 | ENSMUST00000197332 | 78 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm43114-201 | ENSMUST00000198298 | 343 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm39231-201 | ENSMUST00000209813 | 501 nt | TSL 5 BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | AC162931.1-201 | ENSMUST00000214184 | 267 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | AC156794.1-201 | ENSMUST00000214415 | 214 nt | TSL 5 BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | AC154636.2-201 | ENSMUST00000222538 | 161 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm30155-201 | ENSMUST00000223458 | 339 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Snord95-201 | ENSMUST00000082846 | 68 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Mir324-201 | ENSMUST00000083600 | 89 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm24523-201 | ENSMUST00000083965 | 132 nt | BASIC | 0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | 4930511O05Rik-201 | ENSMUST00000155912 | 391 nt | TSL 1 (best) BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm25884-201 | ENSMUST00000157782 | 62 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm25375-201 | ENSMUST00000158157 | 135 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm22764-201 | ENSMUST00000158370 | 92 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Mir1961-201 | ENSMUST00000158643 | 112 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm24084-201 | ENSMUST00000175173 | 137 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm24306-201 | ENSMUST00000180229 | 79 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm44325-201 | ENSMUST00000196757 | 77 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm20144-201 | ENSMUST00000203031 | 165 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm44137-201 | ENSMUST00000203670 | 367 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | AC098718.1-201 | ENSMUST00000226166 | 175 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Stfa3-201 | ENSMUST00000068182 | 412 nt | APPRIS P1 TSL 1 (best) BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | n-R5s96-201 | ENSMUST00000082574 | 124 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm25703-201 | ENSMUST00000083123 | 151 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Mir411-201 | ENSMUST00000083543 | 82 nt | BASIC | 0 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm22831-201 | ENSMUST00000102473 | 109 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm23531-201 | ENSMUST00000104567 | 68 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm13729-201 | ENSMUST00000120328 | 406 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm6985-201 | ENSMUST00000121255 | 271 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm15077-201 | ENSMUST00000122344 | 362 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm25543-201 | ENSMUST00000122678 | 312 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm22186-201 | ENSMUST00000157822 | 122 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm22654-201 | ENSMUST00000157874 | 105 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | 2310075C17Rik-201 | ENSMUST00000161216 | 326 nt | TSL 1 (best) BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm3027-201 | ENSMUST00000167579 | 451 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm23151-201 | ENSMUST00000178061 | 107 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm11168-203 | ENSMUST00000178348 | 672 nt | APPRIS ALT2 TSL 5 BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm44337-201 | ENSMUST00000196553 | 114 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm43944-201 | ENSMUST00000205220 | 120 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | AC124542.1-201 | ENSMUST00000205588 | 908 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | AC109212.1-201 | ENSMUST00000215561 | 427 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm40604-202 | ENSMUST00000219541 | 522 nt | TSL 5 BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm25651-201 | ENSMUST00000083782 | 119 nt | BASIC | -0.01 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm24172-201 | ENSMUST00000104127 | 117 nt | BASIC | -0.02 | □□□□□ -2.41 | | |
| Cdkl1 | Q8CEQ0 | Gm14638-201 | ENSMUST00000121338 | 216 nt | BASIC | -0.02 | □□□□□ -2.41 | | |