Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm20102-201ENSMUST00000222445 220 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.71□□□□□ -2.3
Ccdc28aQ8CEI3 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25377-201ENSMUST00000104334 129 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Mir872-201ENSMUST00000104728 81 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm14269-201ENSMUST00000120455 306 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm13396-201ENSMUST00000120617 271 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm24005-201ENSMUST00000158459 296 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm2962-201ENSMUST00000159266 336 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm23967-201ENSMUST00000175062 78 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25253-201ENSMUST00000179958 107 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm26652-202ENSMUST00000181672 475 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm27755-201ENSMUST00000184623 132 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm28414-201ENSMUST00000190111 294 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Gm37089-201ENSMUST00000195616 129 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Snord68-201ENSMUST00000082516 86 ntBASIC0.7□□□□□ -2.3
Ccdc28aQ8CEI3 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm26339-201ENSMUST00000102368 99 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25544-201ENSMUST00000122676 120 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25559-201ENSMUST00000157182 74 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm17148-201ENSMUST00000164702 249 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm3027-201ENSMUST00000167579 451 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm23419-201ENSMUST00000175523 84 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm26430-201ENSMUST00000178054 107 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm29661-201ENSMUST00000186781 315 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm29308-201ENSMUST00000188863 315 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm37128-201ENSMUST00000192599 232 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25636-201ENSMUST00000082666 133 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.69□□□□□ -2.3
Ccdc28aQ8CEI3 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.68□□□□□ -2.3
Ccdc28aQ8CEI3 Snord98-201ENSMUST00000116819 65 ntBASIC0.68□□□□□ -2.3
Ccdc28aQ8CEI3 Gm14775-201ENSMUST00000122089 310 ntBASIC0.68□□□□□ -2.3
Ccdc28aQ8CEI3 Gm23435-201ENSMUST00000157183 156 ntBASIC0.68□□□□□ -2.3
Ccdc28aQ8CEI3 Gm23329-201ENSMUST00000157415 108 ntBASIC0.68□□□□□ -2.3
Ccdc28aQ8CEI3 Gm26393-201ENSMUST00000157625 129 ntBASIC0.68□□□□□ -2.3
Ccdc28aQ8CEI3 Mir7j-201ENSMUST00000184427 122 ntBASIC0.68□□□□□ -2.3
Ccdc28aQ8CEI3 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.68□□□□□ -2.3
Ccdc28aQ8CEI3 Mir293-201ENSMUST00000104841 80 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm11254-201ENSMUST00000122368 653 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm22477-201ENSMUST00000122569 316 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm23016-201ENSMUST00000158431 62 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm29013-201ENSMUST00000187431 237 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm28597-201ENSMUST00000187664 666 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm29167-201ENSMUST00000190024 377 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm44726-201ENSMUST00000203427 217 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm19855-201ENSMUST00000210145 249 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm11351-202ENSMUST00000225724 478 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25801-201ENSMUST00000082638 106 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25851-201ENSMUST00000082794 107 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Mir196b-201ENSMUST00000083509 85 ntBASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25414-201ENSMUST00000101814 107 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm26500-201ENSMUST00000101867 106 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm14392-201ENSMUST00000120332 401 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm14413-201ENSMUST00000122158 408 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm27926-201ENSMUST00000157180 66 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm22281-201ENSMUST00000157198 103 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25715-201ENSMUST00000158627 125 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Mir3061-201ENSMUST00000175129 91 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Mir3109-201ENSMUST00000175301 88 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm24308-201ENSMUST00000177773 114 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm25314-201ENSMUST00000178810 79 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm27793-201ENSMUST00000183405 76 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm27420-201ENSMUST00000183823 79 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm37801-201ENSMUST00000194754 274 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm42533-201ENSMUST00000196247 157 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm43602-201ENSMUST00000196772 300 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm10264-201ENSMUST00000220589 429 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm9795-201ENSMUST00000062156 693 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Ccdc28aQ8CEI3 Gm14293-201ENSMUST00000118528 577 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm13967-201ENSMUST00000120404 380 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm13720-201ENSMUST00000120741 196 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm13341-201ENSMUST00000120780 672 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm14287-201ENSMUST00000121060 117 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm25011-201ENSMUST00000158398 126 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Mir7663-201ENSMUST00000183950 61 ntBASIC0.65□□□□□ -2.31
Ccdc28aQ8CEI3 Gm28257-201ENSMUST00000185244 463 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms