Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Snord90-201ENSMUST00000104568 111 ntBASIC3.52□□□□□ -1.85
Usp40Q8BWR4 Gm14626-201ENSMUST00000117619 216 ntBASIC3.52□□□□□ -1.85
Usp40Q8BWR4 Gm25642-201ENSMUST00000175137 66 ntBASIC3.52□□□□□ -1.85
Usp40Q8BWR4 Mir7014-201ENSMUST00000183853 63 ntBASIC3.52□□□□□ -1.85
Usp40Q8BWR4 Gm28155-201ENSMUST00000191066 151 ntBASIC3.52□□□□□ -1.85
Usp40Q8BWR4 Gm43199-201ENSMUST00000200019 307 ntBASIC3.52□□□□□ -1.85
Usp40Q8BWR4 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.52□□□□□ -1.85
Usp40Q8BWR4 Mir127-201ENSMUST00000093568 70 ntBASIC3.52□□□□□ -1.85
Usp40Q8BWR4 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Usp40Q8BWR4 Gm22516-201ENSMUST00000158266 124 ntBASIC3.51□□□□□ -1.85
Usp40Q8BWR4 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.51□□□□□ -1.85
Usp40Q8BWR4 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.51□□□□□ -1.85
Usp40Q8BWR4 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.51□□□□□ -1.85
Usp40Q8BWR4 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm24096-201ENSMUST00000103905 110 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm15067-201ENSMUST00000119534 156 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm25980-201ENSMUST00000157176 218 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm23234-201ENSMUST00000157304 134 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm23182-201ENSMUST00000158688 135 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm24877-201ENSMUST00000158779 116 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm24736-201ENSMUST00000158862 130 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm23053-201ENSMUST00000175136 96 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Mir6338-201ENSMUST00000183389 109 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Mir6383-201ENSMUST00000184545 116 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm18346-201ENSMUST00000216782 325 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.5□□□□□ -1.85
Usp40Q8BWR4 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Usp40Q8BWR4 Gm22779-201ENSMUST00000104085 107 ntBASIC3.49□□□□□ -1.85
Usp40Q8BWR4 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.49□□□□□ -1.85
Usp40Q8BWR4 Mir3075-201ENSMUST00000175340 85 ntBASIC3.49□□□□□ -1.85
Usp40Q8BWR4 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.49□□□□□ -1.85
Usp40Q8BWR4 Gm37545-201ENSMUST00000186512 148 ntBASIC3.49□□□□□ -1.85
Usp40Q8BWR4 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.49□□□□□ -1.85
Usp40Q8BWR4 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Usp40Q8BWR4 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm14402-201ENSMUST00000122217 508 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm25045-201ENSMUST00000122670 99 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm24716-201ENSMUST00000157524 104 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm22983-201ENSMUST00000158308 104 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm25470-201ENSMUST00000175576 111 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm27330-201ENSMUST00000184689 132 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm23370-202ENSMUST00000197008 129 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm45687-201ENSMUST00000209454 155 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm24453-201ENSMUST00000083346 76 ntBASIC3.48□□□□□ -1.85
Usp40Q8BWR4 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Usp40Q8BWR4 Gm25022-201ENSMUST00000102205 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Gm23652-201ENSMUST00000116752 107 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Gm14629-201ENSMUST00000122428 144 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Mir467a-6-201ENSMUST00000177790 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Mir467a-3-201ENSMUST00000178082 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Mir467a-7-201ENSMUST00000178635 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Mir467a-10-201ENSMUST00000179320 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Mir467a-5-201ENSMUST00000179352 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Mir467a-2-201ENSMUST00000179447 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Mir467a-9-201ENSMUST00000179752 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Mir467a-4-201ENSMUST00000179923 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Mir467a-8-201ENSMUST00000180070 83 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Gm29167-201ENSMUST00000190024 377 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Gm43993-201ENSMUST00000203972 247 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Gm24929-201ENSMUST00000083403 139 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Usp40Q8BWR4 Gm22004-201ENSMUST00000101884 107 ntBASIC3.46□□□□□ -1.86
Usp40Q8BWR4 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Usp40Q8BWR4 Gm15714-201ENSMUST00000117168 250 ntBASIC3.46□□□□□ -1.86
Usp40Q8BWR4 Gm22490-201ENSMUST00000157188 119 ntBASIC3.46□□□□□ -1.86
Usp40Q8BWR4 Gm25253-201ENSMUST00000179958 107 ntBASIC3.46□□□□□ -1.86
Usp40Q8BWR4 Gm27369-201ENSMUST00000185182 71 ntBASIC3.46□□□□□ -1.86
Usp40Q8BWR4 Gm18982-201ENSMUST00000198118 529 ntBASIC3.46□□□□□ -1.86
Usp40Q8BWR4 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.46□□□□□ -1.86
Usp40Q8BWR4 Gm24697-201ENSMUST00000083881 107 ntBASIC3.46□□□□□ -1.86
Usp40Q8BWR4 Gm24283-201ENSMUST00000104233 107 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm24440-201ENSMUST00000157236 63 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm26104-201ENSMUST00000157250 108 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm24061-201ENSMUST00000157489 120 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm25866-201ENSMUST00000158245 112 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm24512-201ENSMUST00000174963 65 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm25464-201ENSMUST00000175481 107 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm25646-201ENSMUST00000178527 79 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm28000-201ENSMUST00000184380 85 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm29613-201ENSMUST00000185846 313 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm29544-201ENSMUST00000188860 313 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm28808-201ENSMUST00000190978 313 ntBASIC3.45□□□□□ -1.86
Usp40Q8BWR4 Gm37290-201ENSMUST00000195775 339 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms