Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm43993-201ENSMUST00000203972 247 ntBASIC1.92□□□□□ -2.1
Tdp1Q8BJ37 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.92□□□□□ -2.1
Tdp1Q8BJ37 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.92□□□□□ -2.1
Tdp1Q8BJ37 Gm45313-201ENSMUST00000210584 178 ntBASIC1.92□□□□□ -2.1
Tdp1Q8BJ37 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.92□□□□□ -2.1
Tdp1Q8BJ37 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.92□□□□□ -2.1
Tdp1Q8BJ37 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.92□□□□□ -2.1
Tdp1Q8BJ37 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm24049-201ENSMUST00000102409 100 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Mir875-201ENSMUST00000104698 78 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm11904-201ENSMUST00000120562 248 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm25961-201ENSMUST00000157174 135 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm23535-201ENSMUST00000157542 106 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm22665-201ENSMUST00000158720 275 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm27271-201ENSMUST00000183509 170 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm19901-201ENSMUST00000192191 495 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Mir3535-201ENSMUST00000197651 147 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Mir7215-201ENSMUST00000200383 51 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm44959-201ENSMUST00000209127 231 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 mt-Td-201ENSMUST00000082404 70 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm23451-201ENSMUST00000083328 122 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.91□□□□□ -2.1
Tdp1Q8BJ37 Gm26154-201ENSMUST00000102339 96 ntBASIC1.9□□□□□ -2.11
Tdp1Q8BJ37 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Tdp1Q8BJ37 Gm22215-201ENSMUST00000157558 96 ntBASIC1.9□□□□□ -2.11
Tdp1Q8BJ37 Gm26265-202ENSMUST00000196326 133 ntBASIC1.9□□□□□ -2.11
Tdp1Q8BJ37 Mir7217-201ENSMUST00000200304 62 ntBASIC1.9□□□□□ -2.11
Tdp1Q8BJ37 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.9□□□□□ -2.11
Tdp1Q8BJ37 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Tdp1Q8BJ37 Gm22294-201ENSMUST00000083308 104 ntBASIC1.9□□□□□ -2.11
Tdp1Q8BJ37 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm25090-201ENSMUST00000104000 132 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm22193-201ENSMUST00000116868 76 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm12926-201ENSMUST00000121158 409 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm24896-201ENSMUST00000122741 135 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm23324-201ENSMUST00000157421 131 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm22315-201ENSMUST00000158010 143 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Mir28b-201ENSMUST00000175399 80 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm37557-201ENSMUST00000191640 139 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm44666-201ENSMUST00000208544 391 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm29818-201ENSMUST00000218070 165 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm22571-201ENSMUST00000082984 70 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.89□□□□□ -2.11
Tdp1Q8BJ37 Gm24116-201ENSMUST00000103975 107 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm14883-201ENSMUST00000120179 157 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm14919-201ENSMUST00000120839 390 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm11388-201ENSMUST00000120908 159 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm22537-201ENSMUST00000158172 199 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm27540-201ENSMUST00000184950 187 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Mir6376-201ENSMUST00000185149 131 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm44482-201ENSMUST00000199232 103 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Mir1291-201ENSMUST00000199842 117 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm20144-201ENSMUST00000203031 165 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm26497-201ENSMUST00000083146 107 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Snora34-201ENSMUST00000083402 138 ntBASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Tdp1Q8BJ37 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm11786-201ENSMUST00000120799 155 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm24902-201ENSMUST00000158126 123 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Snord11-201ENSMUST00000158468 84 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm25051-201ENSMUST00000158602 249 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm26004-201ENSMUST00000158804 116 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm25831-201ENSMUST00000158924 163 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm23967-201ENSMUST00000175062 78 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm24818-201ENSMUST00000175093 161 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm24656-201ENSMUST00000177548 132 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm23267-201ENSMUST00000178490 132 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm27747-201ENSMUST00000184707 85 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm37763-201ENSMUST00000193445 120 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm23423-201ENSMUST00000082782 106 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm24355-201ENSMUST00000082858 122 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm24163-201ENSMUST00000093660 132 ntBASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Tdp1Q8BJ37 Gm22535-201ENSMUST00000158174 119 ntBASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 Gm28794-201ENSMUST00000185276 136 ntBASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 Gm25402-201ENSMUST00000082966 131 ntBASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 Gm25141-201ENSMUST00000083177 107 ntBASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 Mir30d-201ENSMUST00000083503 82 ntBASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 Mir410-201ENSMUST00000083563 81 ntBASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Tdp1Q8BJ37 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.85□□□□□ -2.11
Tdp1Q8BJ37 Gm14882-201ENSMUST00000117216 218 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 191.4 ms