Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Gm26080-201ENSMUST00000104069 131 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Gm14922-201ENSMUST00000121131 163 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Gm23277-201ENSMUST00000157914 136 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Gm22485-201ENSMUST00000157990 109 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Gm27271-201ENSMUST00000183509 170 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Gm24037-201ENSMUST00000082871 180 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Gm25409-201ENSMUST00000083764 131 ntBASIC1.27□□□□□ -2.21
Ccdc40Q8BI79 Gm14923-201ENSMUST00000118270 155 ntBASIC1.26□□□□□ -2.21
Ccdc40Q8BI79 Gm15162-201ENSMUST00000119325 283 ntBASIC1.26□□□□□ -2.21
Ccdc40Q8BI79 Gm24777-201ENSMUST00000157644 107 ntBASIC1.26□□□□□ -2.21
Ccdc40Q8BI79 Gm24393-201ENSMUST00000158135 97 ntBASIC1.26□□□□□ -2.21
Ccdc40Q8BI79 Mir3061-201ENSMUST00000175129 91 ntBASIC1.26□□□□□ -2.21
Ccdc40Q8BI79 Gm20144-201ENSMUST00000203031 165 ntBASIC1.26□□□□□ -2.21
Ccdc40Q8BI79 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.26□□□□□ -2.21
Ccdc40Q8BI79 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Ccdc40Q8BI79 Gm23289-201ENSMUST00000175615 108 ntBASIC1.25□□□□□ -2.21
Ccdc40Q8BI79 Gm23191-201ENSMUST00000179147 107 ntBASIC1.25□□□□□ -2.21
Ccdc40Q8BI79 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.25□□□□□ -2.21
Ccdc40Q8BI79 Gm23055-201ENSMUST00000082805 94 ntBASIC1.25□□□□□ -2.21
Ccdc40Q8BI79 Gm25128-201ENSMUST00000083339 76 ntBASIC1.25□□□□□ -2.21
Ccdc40Q8BI79 Mir211-201ENSMUST00000083651 106 ntBASIC1.25□□□□□ -2.21
Ccdc40Q8BI79 Gm26500-201ENSMUST00000101867 106 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm22750-201ENSMUST00000102076 103 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm14296-202ENSMUST00000108931 750 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm24588-201ENSMUST00000116696 83 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm19123-201ENSMUST00000190716 651 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm9251-201ENSMUST00000197202 628 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm22980-201ENSMUST00000082608 70 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm25579-201ENSMUST00000083407 106 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm26164-201ENSMUST00000083793 104 ntBASIC1.24□□□□□ -2.21
Ccdc40Q8BI79 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 Gm23336-201ENSMUST00000117023 123 ntBASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 Gm13967-201ENSMUST00000120404 380 ntBASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 Gm22985-201ENSMUST00000122754 116 ntBASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 Gm22447-201ENSMUST00000158155 92 ntBASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 Gm42719-201ENSMUST00000197393 355 ntBASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.23□□□□□ -2.21
Ccdc40Q8BI79 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm23013-201ENSMUST00000104146 106 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm25805-201ENSMUST00000122788 108 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm22233-201ENSMUST00000157464 114 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm22551-201ENSMUST00000157795 103 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm25868-201ENSMUST00000158253 114 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm26213-201ENSMUST00000158582 110 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm24277-201ENSMUST00000158661 104 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Mir5104-201ENSMUST00000175319 94 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm24487-201ENSMUST00000178017 63 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm27898-201ENSMUST00000183987 80 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm28794-201ENSMUST00000185276 136 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Mir7118-201ENSMUST00000197760 61 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm26224-201ENSMUST00000082506 80 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm23721-201ENSMUST00000083005 107 ntBASIC1.22□□□□□ -2.21
Ccdc40Q8BI79 Gm25938-201ENSMUST00000104139 166 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Gm23011-201ENSMUST00000104148 132 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Gm22477-201ENSMUST00000122569 316 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Gm25663-201ENSMUST00000157698 135 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Gm24221-201ENSMUST00000158833 313 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Mir7063-201ENSMUST00000184158 91 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Gm37399-201ENSMUST00000195224 416 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.21□□□□□ -2.22
Ccdc40Q8BI79 Gm23059-201ENSMUST00000158978 107 ntBASIC1.2□□□□□ -2.22
Ccdc40Q8BI79 Gm23660-201ENSMUST00000178362 79 ntBASIC1.2□□□□□ -2.22
Ccdc40Q8BI79 Gm24088-201ENSMUST00000179100 79 ntBASIC1.2□□□□□ -2.22
Ccdc40Q8BI79 Gm27236-201ENSMUST00000184147 442 ntBASIC1.2□□□□□ -2.22
Ccdc40Q8BI79 Gm20257-202ENSMUST00000188643 130 ntBASIC1.2□□□□□ -2.22
Ccdc40Q8BI79 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.2□□□□□ -2.22
Ccdc40Q8BI79 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Ccdc40Q8BI79 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Ccdc40Q8BI79 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.19□□□□□ -2.22
Ccdc40Q8BI79 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.19□□□□□ -2.22
Ccdc40Q8BI79 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.19□□□□□ -2.22
Ccdc40Q8BI79 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.19□□□□□ -2.22
Ccdc40Q8BI79 Gm24808-201ENSMUST00000157993 118 ntBASIC1.19□□□□□ -2.22
Ccdc40Q8BI79 Gm27539-201ENSMUST00000184971 224 ntBASIC1.19□□□□□ -2.22
Ccdc40Q8BI79 Snora41-201ENSMUST00000082668 132 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms