Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 Gm26493-201ENSMUST00000083155 136 ntBASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ubfd1Q78JW9 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Snora36b-201ENSMUST00000104383 132 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm26015-201ENSMUST00000104402 125 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm26342-201ENSMUST00000104557 129 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm22486-201ENSMUST00000116815 137 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm23983-201ENSMUST00000157142 114 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm23536-201ENSMUST00000157541 134 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm24006-201ENSMUST00000158462 132 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm24837-201ENSMUST00000158683 81 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm17161-201ENSMUST00000169187 524 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm25996-201ENSMUST00000175393 117 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm24390-201ENSMUST00000179578 62 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm44352-201ENSMUST00000196358 110 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm45791-201ENSMUST00000212908 352 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm24615-201ENSMUST00000083268 113 ntBASIC2.34□□□□□ -2.03
Ubfd1Q78JW9 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.34□□□□□ -2.04
Ubfd1Q78JW9 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.34□□□□□ -2.04
Ubfd1Q78JW9 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Gm25485-201ENSMUST00000104120 132 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Gm12815-201ENSMUST00000121737 135 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Gm24475-201ENSMUST00000157435 143 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Gm22097-201ENSMUST00000157929 278 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Gm23223-201ENSMUST00000158119 127 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Gm22666-201ENSMUST00000158717 164 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Mir5118-201ENSMUST00000175551 67 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Gm18546-201ENSMUST00000197245 676 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Gm23249-201ENSMUST00000083369 161 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 Gm24698-201ENSMUST00000083883 130 ntBASIC2.33□□□□□ -2.04
Ubfd1Q78JW9 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm23472-201ENSMUST00000101806 191 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm26135-201ENSMUST00000101993 72 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm24440-201ENSMUST00000157236 63 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm24512-201ENSMUST00000174963 65 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm24497-201ENSMUST00000177868 191 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Snord50b-201ENSMUST00000178497 72 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm23002-201ENSMUST00000179221 107 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Mir8090-201ENSMUST00000185078 136 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm29022-201ENSMUST00000190702 225 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm8031-201ENSMUST00000213430 626 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm23444-201ENSMUST00000082922 191 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.32□□□□□ -2.04
Ubfd1Q78JW9 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Gm15162-201ENSMUST00000119325 283 ntBASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Gm16584-201ENSMUST00000159267 189 ntBASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Gm25749-201ENSMUST00000175485 111 ntBASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Gm20630-201ENSMUST00000177387 551 ntBASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Gm45456-201ENSMUST00000210841 243 ntBASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.31□□□□□ -2.04
Ubfd1Q78JW9 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Gm23841-201ENSMUST00000116951 114 ntBASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Gm22731-201ENSMUST00000158086 94 ntBASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Gm24210-201ENSMUST00000158263 133 ntBASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Gm45445-201ENSMUST00000209586 232 ntBASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Gm45522-201ENSMUST00000210784 166 ntBASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Gm7214-201ENSMUST00000222428 272 ntBASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Ubfd1Q78JW9 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 Gm22935-201ENSMUST00000103960 104 ntBASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 Gm23258-201ENSMUST00000158319 106 ntBASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 Gm22433-201ENSMUST00000158550 142 ntBASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 Gm27421-201ENSMUST00000184729 167 ntBASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 Mir378a-201ENSMUST00000198300 66 ntBASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Ubfd1Q78JW9 Mir541-201ENSMUST00000102097 90 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Gm24594-201ENSMUST00000122502 99 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Gm23980-201ENSMUST00000157135 158 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Gm23892-201ENSMUST00000158105 130 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Gm26157-201ENSMUST00000158974 126 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Gm27399-201ENSMUST00000184250 78 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Gm42672-201ENSMUST00000197821 352 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Snord104-201ENSMUST00000083192 70 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Gm25628-201ENSMUST00000084002 105 ntBASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ubfd1Q78JW9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 136.4 ms