Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm22338-201ENSMUST00000157715 129 ntBASIC2.42□□□□□ -2.02
Ddx58Q6Q899 Gm23043-201ENSMUST00000157890 109 ntBASIC2.42□□□□□ -2.02
Ddx58Q6Q899 Gm32175-201ENSMUST00000193641 346 ntBASIC2.42□□□□□ -2.02
Ddx58Q6Q899 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.42□□□□□ -2.02
Ddx58Q6Q899 Gm45543-201ENSMUST00000209327 88 ntBASIC2.42□□□□□ -2.02
Ddx58Q6Q899 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.42□□□□□ -2.02
Ddx58Q6Q899 Gm5899-201ENSMUST00000071770 270 ntBASIC2.42□□□□□ -2.02
Ddx58Q6Q899 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.42□□□□□ -2.02
Ddx58Q6Q899 Gm23579-201ENSMUST00000158528 103 ntBASIC2.41□□□□□ -2.02
Ddx58Q6Q899 Mir7009-201ENSMUST00000184519 64 ntBASIC2.41□□□□□ -2.02
Ddx58Q6Q899 Gm43220-201ENSMUST00000199299 282 ntBASIC2.41□□□□□ -2.02
Ddx58Q6Q899 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.41□□□□□ -2.02
Ddx58Q6Q899 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.41□□□□□ -2.02
Ddx58Q6Q899 Gm25402-201ENSMUST00000082966 131 ntBASIC2.41□□□□□ -2.02
Ddx58Q6Q899 Gm24615-201ENSMUST00000083268 113 ntBASIC2.41□□□□□ -2.02
Ddx58Q6Q899 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Ddx58Q6Q899 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.4□□□□□ -2.03
Ddx58Q6Q899 Gm22315-201ENSMUST00000158010 143 ntBASIC2.4□□□□□ -2.03
Ddx58Q6Q899 Gm25371-201ENSMUST00000158162 101 ntBASIC2.4□□□□□ -2.03
Ddx58Q6Q899 Gm23090-201ENSMUST00000177331 78 ntBASIC2.4□□□□□ -2.03
Ddx58Q6Q899 Gm37579-201ENSMUST00000194291 142 ntBASIC2.4□□□□□ -2.03
Ddx58Q6Q899 Gm38060-201ENSMUST00000194822 464 ntBASIC2.4□□□□□ -2.03
Ddx58Q6Q899 Gm45456-201ENSMUST00000210841 243 ntBASIC2.4□□□□□ -2.03
Ddx58Q6Q899 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.4□□□□□ -2.03
Ddx58Q6Q899 Gm27521-201ENSMUST00000184022 64 ntBASIC2.39□□□□□ -2.03
Ddx58Q6Q899 Mir376a-201ENSMUST00000197584 68 ntBASIC2.39□□□□□ -2.03
Ddx58Q6Q899 Snord43-201ENSMUST00000199549 108 ntBASIC2.39□□□□□ -2.03
Ddx58Q6Q899 Gm43865-201ENSMUST00000204721 127 ntBASIC2.39□□□□□ -2.03
Ddx58Q6Q899 Gm45654-201ENSMUST00000210980 123 ntBASIC2.39□□□□□ -2.03
Ddx58Q6Q899 Gm29818-201ENSMUST00000218070 165 ntBASIC2.39□□□□□ -2.03
Ddx58Q6Q899 Gm46997-201ENSMUST00000222108 217 ntBASIC2.39□□□□□ -2.03
Ddx58Q6Q899 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm12143-201ENSMUST00000119666 332 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm23230-201ENSMUST00000157298 133 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm24333-201ENSMUST00000175101 84 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm27722-201ENSMUST00000183908 76 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm27979-201ENSMUST00000185126 56 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm29490-201ENSMUST00000190923 342 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Mir7217-201ENSMUST00000200304 62 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.38□□□□□ -2.03
Ddx58Q6Q899 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm26497-201ENSMUST00000083146 107 ntBASIC2.38□□□□□ -2.03
Ddx58Q6Q899 Gm23010-201ENSMUST00000104151 126 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Gm14919-201ENSMUST00000120839 390 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Gm25836-201ENSMUST00000158918 123 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Gm22510-201ENSMUST00000179304 79 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Gm26336-201ENSMUST00000179449 79 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Gm26390-201ENSMUST00000179628 79 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Mir7678-201ENSMUST00000185076 71 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Gm29604-201ENSMUST00000187176 163 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Mir465d-201ENSMUST00000196314 58 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Mir429-201ENSMUST00000083493 83 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Mir151-201ENSMUST00000083678 68 ntBASIC2.37□□□□□ -2.03
Ddx58Q6Q899 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Gm11794-201ENSMUST00000119446 237 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Gm22027-201ENSMUST00000122737 127 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Rnu7-201ENSMUST00000158458 62 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Gm26024-201ENSMUST00000158657 322 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Gm17052-201ENSMUST00000165496 289 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Mir3569-201ENSMUST00000185080 58 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Gm9156-201ENSMUST00000189660 463 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Mir3970-201ENSMUST00000199287 90 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Gm45313-201ENSMUST00000210584 178 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Gm26922-201ENSMUST00000082687 72 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Gm22683-201ENSMUST00000082854 137 ntBASIC2.36□□□□□ -2.03
Ddx58Q6Q899 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ddx58Q6Q899 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm11606-201ENSMUST00000120706 617 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm15281-201ENSMUST00000125181 351 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm23670-201ENSMUST00000157469 119 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm25491-201ENSMUST00000158733 308 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Mir3086-201ENSMUST00000175072 87 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm7958-201ENSMUST00000178255 468 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm7950-201ENSMUST00000179633 468 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.35□□□□□ -2.03
Ddx58Q6Q899 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm24412-201ENSMUST00000083426 109 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm22723-201ENSMUST00000083820 129 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm10222-201ENSMUST00000088336 294 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.35□□□□□ -2.03
Ddx58Q6Q899 Gm13714-201ENSMUST00000117313 221 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm22768-201ENSMUST00000158366 153 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm25994-201ENSMUST00000175392 101 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.34□□□□□ -2.03
Ddx58Q6Q899 Gm28453-203ENSMUST00000187041 189 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms