Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Smarca1Q6PGB8 Gm12837-201ENSMUST00000120131 373 ntBASIC2.24□□□□□ -2.05
Smarca1Q6PGB8 Gm26345-201ENSMUST00000157534 120 ntBASIC2.24□□□□□ -2.05
Smarca1Q6PGB8 Gm24858-201ENSMUST00000158058 323 ntBASIC2.24□□□□□ -2.05
Smarca1Q6PGB8 Gm43865-201ENSMUST00000204721 127 ntBASIC2.24□□□□□ -2.05
Smarca1Q6PGB8 Gm44533-201ENSMUST00000207782 268 ntBASIC2.24□□□□□ -2.05
Smarca1Q6PGB8 Gm26107-201ENSMUST00000083972 107 ntBASIC2.24□□□□□ -2.05
Smarca1Q6PGB8 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Gm13714-201ENSMUST00000117313 221 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Gm11794-201ENSMUST00000119446 237 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Gm27443-201ENSMUST00000184660 98 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Mir376a-201ENSMUST00000197584 68 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Gm42594-201ENSMUST00000199511 246 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Gm29818-201ENSMUST00000218070 165 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Mir107-201ENSMUST00000083660 87 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Snora33-201ENSMUST00000093556 129 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.23□□□□□ -2.05
Smarca1Q6PGB8 Gm23214-201ENSMUST00000122716 157 ntBASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 Gm8121-201ENSMUST00000153583 499 ntBASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 Gm22768-201ENSMUST00000158366 153 ntBASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 Mir465d-201ENSMUST00000196314 58 ntBASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 Gm45543-201ENSMUST00000209327 88 ntBASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 Gm25813-201ENSMUST00000082748 191 ntBASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 Gm24536-201ENSMUST00000083144 107 ntBASIC2.22□□□□□ -2.05
Smarca1Q6PGB8 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.05
Smarca1Q6PGB8 Gm11322-201ENSMUST00000118095 435 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm15002-201ENSMUST00000118406 452 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm15213-201ENSMUST00000122098 216 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm16328-201ENSMUST00000126985 196 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm27723-201ENSMUST00000157398 63 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Mir1949-201ENSMUST00000157434 141 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm25836-201ENSMUST00000158918 123 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm24510-201ENSMUST00000174965 94 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Mir3086-201ENSMUST00000175072 87 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm25994-201ENSMUST00000175392 101 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm25397-201ENSMUST00000176951 92 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Mir6901-201ENSMUST00000185062 62 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm27979-201ENSMUST00000185126 56 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm28992-201ENSMUST00000190534 139 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm24460-201ENSMUST00000082731 106 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm26493-201ENSMUST00000083155 136 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm22287-201ENSMUST00000083197 107 ntBASIC2.21□□□□□ -2.06
Smarca1Q6PGB8 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm22315-201ENSMUST00000158010 143 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm26405-201ENSMUST00000158495 100 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm23579-201ENSMUST00000158528 103 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm25491-201ENSMUST00000158733 308 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm23289-201ENSMUST00000175615 108 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm7958-201ENSMUST00000178255 468 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm7950-201ENSMUST00000179633 468 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm37579-201ENSMUST00000194291 142 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm43035-201ENSMUST00000197626 517 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm44408-201ENSMUST00000200205 66 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm45654-201ENSMUST00000210980 123 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm11351-202ENSMUST00000225724 478 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm25636-201ENSMUST00000082666 133 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Snord118-201ENSMUST00000082965 135 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm24316-201ENSMUST00000083041 107 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Gm24412-201ENSMUST00000083426 109 ntBASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Smarca1Q6PGB8 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 Gm24079-201ENSMUST00000104352 132 ntBASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 Gm25658-201ENSMUST00000158472 128 ntBASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 Gm27722-201ENSMUST00000183908 76 ntBASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 Mir7225-201ENSMUST00000184178 54 ntBASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 Gm44491-201ENSMUST00000196794 96 ntBASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 Gm25930-201ENSMUST00000082785 107 ntBASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Smarca1Q6PGB8 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Mir758-201ENSMUST00000103260 81 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Gm24478-201ENSMUST00000157439 158 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Gm22551-201ENSMUST00000157795 103 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Rnu7-201ENSMUST00000158458 62 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Mir669n-201ENSMUST00000158636 54 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Gm28453-203ENSMUST00000187041 189 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Gm20923-201ENSMUST00000190009 319 ntBASIC2.18□□□□□ -2.06
Smarca1Q6PGB8 Gm21088-201ENSMUST00000190875 316 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 255.5 ms