Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm23584-201ENSMUST00000157655 129 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm22338-201ENSMUST00000157715 129 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm23033-201ENSMUST00000157996 134 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm22767-201ENSMUST00000158365 165 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm26157-201ENSMUST00000158974 126 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Mir6481-201ENSMUST00000184617 110 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm37104-201ENSMUST00000193278 196 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm33866-201ENSMUST00000196911 289 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Mir3961-201ENSMUST00000198795 59 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm7214-201ENSMUST00000222428 272 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm23461-201ENSMUST00000083265 107 ntBASIC2.54□□□□□ -2
Rnf220Q6PDX6 Gm13801-201ENSMUST00000120750 160 ntBASIC2.53□□□□□ -2
Rnf220Q6PDX6 Gm15272-201ENSMUST00000120865 233 ntBASIC2.53□□□□□ -2
Rnf220Q6PDX6 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.53□□□□□ -2
Rnf220Q6PDX6 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.53□□□□□ -2
Rnf220Q6PDX6 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.53□□□□□ -2
Rnf220Q6PDX6 Gm35736-201ENSMUST00000203681 313 ntBASIC2.53□□□□□ -2
Rnf220Q6PDX6 Gm25634-201ENSMUST00000082667 105 ntBASIC2.53□□□□□ -2
Rnf220Q6PDX6 Snord82-201ENSMUST00000082889 70 ntBASIC2.53□□□□□ -2
Rnf220Q6PDX6 Gm22169-201ENSMUST00000083229 107 ntBASIC2.53□□□□□ -2
Rnf220Q6PDX6 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Rnf220Q6PDX6 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Gm24127-201ENSMUST00000104110 130 ntBASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Rnu7-201ENSMUST00000158458 62 ntBASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Gm43722-201ENSMUST00000196054 124 ntBASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Gm24536-201ENSMUST00000083144 107 ntBASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Mir423-201ENSMUST00000083584 109 ntBASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Rnf220Q6PDX6 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm22782-201ENSMUST00000104082 132 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm24632-201ENSMUST00000122770 323 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm14389-201ENSMUST00000140453 241 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm22553-201ENSMUST00000157797 295 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm26482-201ENSMUST00000158015 62 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm23194-201ENSMUST00000158813 105 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Snord93-201ENSMUST00000175580 71 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm42960-201ENSMUST00000202160 241 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm45116-201ENSMUST00000207392 275 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm45002-201ENSMUST00000208045 120 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm25796-201ENSMUST00000082645 163 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Snord118-201ENSMUST00000082965 135 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm23249-201ENSMUST00000083369 161 ntBASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Rnf220Q6PDX6 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Rnf220Q6PDX6 Gm22939-201ENSMUST00000103958 131 ntBASIC2.5□□□□□ -2.01
Rnf220Q6PDX6 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.5□□□□□ -2.01
Rnf220Q6PDX6 Gm25371-201ENSMUST00000158162 101 ntBASIC2.5□□□□□ -2.01
Rnf220Q6PDX6 Gm24082-201ENSMUST00000175175 83 ntBASIC2.5□□□□□ -2.01
Rnf220Q6PDX6 Mir466p-201ENSMUST00000103925 89 ntBASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 Gm15214-201ENSMUST00000122155 470 ntBASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 Gm9156-201ENSMUST00000189660 463 ntBASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 Gm2077-201ENSMUST00000195017 319 ntBASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.49□□□□□ -2.01
Rnf220Q6PDX6 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Gm22947-201ENSMUST00000158559 91 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Gm22075-201ENSMUST00000158599 192 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Gm26005-201ENSMUST00000158802 134 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Gm25142-201ENSMUST00000082698 107 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Mir193a-201ENSMUST00000083461 66 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 AF357428-201ENSMUST00000083815 69 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Gm25513-201ENSMUST00000083861 162 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.48□□□□□ -2.01
Rnf220Q6PDX6 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Rnf220Q6PDX6 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.47□□□□□ -2.01
Rnf220Q6PDX6 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.47□□□□□ -2.01
Rnf220Q6PDX6 Gm24443-201ENSMUST00000157242 132 ntBASIC2.47□□□□□ -2.01
Rnf220Q6PDX6 Gm24787-201ENSMUST00000157380 123 ntBASIC2.47□□□□□ -2.01
Rnf220Q6PDX6 Gm23865-201ENSMUST00000157723 97 ntBASIC2.47□□□□□ -2.01
Rnf220Q6PDX6 Gm23223-201ENSMUST00000158119 127 ntBASIC2.47□□□□□ -2.01
Rnf220Q6PDX6 Mir669k-201ENSMUST00000177742 127 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 189.3 ms