Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm25223-201ENSMUST00000158200 110 ntBASIC2.56□□□□□ -2
Sp140Q6NSQ5 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.56□□□□□ -2
Sp140Q6NSQ5 Gm24813-201ENSMUST00000175310 84 ntBASIC2.56□□□□□ -2
Sp140Q6NSQ5 Gm44393-201ENSMUST00000197418 138 ntBASIC2.56□□□□□ -2
Sp140Q6NSQ5 Gm25634-201ENSMUST00000082667 105 ntBASIC2.56□□□□□ -2
Sp140Q6NSQ5 Snord104-201ENSMUST00000083192 70 ntBASIC2.56□□□□□ -2
Sp140Q6NSQ5 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.56□□□□□ -2
Sp140Q6NSQ5 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.55□□□□□ -2
Sp140Q6NSQ5 Snora36b-201ENSMUST00000104383 132 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm22193-201ENSMUST00000116868 76 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm23599-201ENSMUST00000157261 251 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm24015-201ENSMUST00000157725 232 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm33866-201ENSMUST00000196911 289 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Snord80-202ENSMUST00000199023 77 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Mir721-201ENSMUST00000200230 88 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm44478-201ENSMUST00000204875 114 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm22249-201ENSMUST00000082485 136 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Gm22421-201ENSMUST00000083058 107 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.55□□□□□ -2
Sp140Q6NSQ5 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sp140Q6NSQ5 Gm26247-201ENSMUST00000116702 91 ntBASIC2.54□□□□□ -2
Sp140Q6NSQ5 Gm23990-201ENSMUST00000117031 117 ntBASIC2.54□□□□□ -2
Sp140Q6NSQ5 Mir7k-201ENSMUST00000184115 110 ntBASIC2.54□□□□□ -2
Sp140Q6NSQ5 Gm27505-201ENSMUST00000185071 110 ntBASIC2.54□□□□□ -2
Sp140Q6NSQ5 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.54□□□□□ -2
Sp140Q6NSQ5 Mir1291-201ENSMUST00000199842 117 ntBASIC2.54□□□□□ -2
Sp140Q6NSQ5 Gm44938-201ENSMUST00000208614 427 ntBASIC2.54□□□□□ -2
Sp140Q6NSQ5 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.54□□□□□ -2
Sp140Q6NSQ5 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.54□□□□□ -2
Sp140Q6NSQ5 Snora34-201ENSMUST00000083402 138 ntBASIC2.54□□□□□ -2
Sp140Q6NSQ5 Gm24762-201ENSMUST00000083689 104 ntBASIC2.54□□□□□ -2
Sp140Q6NSQ5 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Sp140Q6NSQ5 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sp140Q6NSQ5 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.53□□□□□ -2
Sp140Q6NSQ5 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm23175-201ENSMUST00000104371 132 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm14748-201ENSMUST00000119819 411 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm25373-201ENSMUST00000158156 115 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm6788-201ENSMUST00000166459 270 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm17161-201ENSMUST00000169187 524 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm20718-201ENSMUST00000176058 259 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm5224-201ENSMUST00000183060 350 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm28169-201ENSMUST00000190342 345 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm43676-201ENSMUST00000197532 540 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm43626-201ENSMUST00000198575 162 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm45013-201ENSMUST00000206883 178 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm11351-202ENSMUST00000225724 478 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm25813-201ENSMUST00000082748 191 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Gm23246-201ENSMUST00000083371 67 ntBASIC2.53□□□□□ -2
Sp140Q6NSQ5 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm12449-201ENSMUST00000117572 234 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm12513-201ENSMUST00000118617 352 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm24896-201ENSMUST00000122741 135 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm25599-201ENSMUST00000157816 103 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Mir669k-201ENSMUST00000177742 127 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm25933-201ENSMUST00000178943 108 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm25673-201ENSMUST00000179957 127 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm3852-201ENSMUST00000182781 264 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm44564-201ENSMUST00000207985 180 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm25204-201ENSMUST00000082843 106 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.52□□□□□ -2.01
Sp140Q6NSQ5 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm15861-201ENSMUST00000120979 339 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm14491-201ENSMUST00000121919 199 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm24627-201ENSMUST00000122764 138 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm22483-201ENSMUST00000157986 274 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm23033-201ENSMUST00000157996 134 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm24958-201ENSMUST00000158009 97 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm27379-201ENSMUST00000183730 123 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm37037-201ENSMUST00000194475 424 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm34139-201ENSMUST00000196166 294 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm45116-201ENSMUST00000207392 275 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm8031-201ENSMUST00000213430 626 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm24977-201ENSMUST00000083106 163 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Gm25895-201ENSMUST00000083714 100 ntBASIC2.51□□□□□ -2.01
Sp140Q6NSQ5 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Sp140Q6NSQ5 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sp140Q6NSQ5 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sp140Q6NSQ5 Gm13885-201ENSMUST00000117569 187 ntBASIC2.5□□□□□ -2.01
Sp140Q6NSQ5 Gm23980-201ENSMUST00000157135 158 ntBASIC2.5□□□□□ -2.01
Sp140Q6NSQ5 Gm25425-201ENSMUST00000157611 96 ntBASIC2.5□□□□□ -2.01
Sp140Q6NSQ5 Gm23223-201ENSMUST00000158119 127 ntBASIC2.5□□□□□ -2.01
Sp140Q6NSQ5 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 131.6 ms