Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.45□□□□□ -2.02
Ift88Q61371 Mir423-201ENSMUST00000083584 109 ntBASIC2.45□□□□□ -2.02
Ift88Q61371 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Ift88Q61371 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Gm23803-201ENSMUST00000104610 132 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Gm25270-201ENSMUST00000122606 138 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Gm25961-201ENSMUST00000157174 135 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Gm24440-201ENSMUST00000157236 63 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Gm25720-201ENSMUST00000157503 105 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Gm24512-201ENSMUST00000174963 65 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Gm27421-201ENSMUST00000184729 167 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Gm44256-201ENSMUST00000203304 335 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Mir29c-201ENSMUST00000083614 88 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.44□□□□□ -2.02
Ift88Q61371 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Gm26135-201ENSMUST00000101993 72 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Mir374b-201ENSMUST00000102314 95 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Gm24049-201ENSMUST00000102409 100 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Gm22151-201ENSMUST00000116963 58 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Gm24691-201ENSMUST00000157762 140 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Gm25863-201ENSMUST00000158249 329 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.43□□□□□ -2.02
Ift88Q61371 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Gm20438-201ENSMUST00000174441 329 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ift88Q61371 Snord50b-201ENSMUST00000178497 72 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Gm24390-201ENSMUST00000179578 62 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Mir7k-201ENSMUST00000184115 110 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 Gm24615-201ENSMUST00000083268 113 ntBASIC2.43□□□□□ -2.02
Ift88Q61371 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Ift88Q61371 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Ift88Q61371 Gm24122-201ENSMUST00000104107 132 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 Gm25316-201ENSMUST00000116826 118 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 Gm28020-201ENSMUST00000157739 67 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 Gm22093-201ENSMUST00000158980 111 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 Mir3076-201ENSMUST00000175415 60 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 Gm37715-201ENSMUST00000193206 235 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 Gm45386-201ENSMUST00000210194 218 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.42□□□□□ -2.02
Ift88Q61371 Gm6109-201ENSMUST00000223297 348 ntBASIC2.42□□□□□ -2.02
Ift88Q61371 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Ift88Q61371 Gm25407-201ENSMUST00000104102 134 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm24640-201ENSMUST00000116949 126 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm22626-201ENSMUST00000116990 126 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm23901-201ENSMUST00000157570 107 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm24761-201ENSMUST00000179589 127 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm24488-201ENSMUST00000179934 127 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm25701-201ENSMUST00000179988 127 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm26431-201ENSMUST00000180199 127 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ift88Q61371 Gm27878-201ENSMUST00000184000 106 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm43563-201ENSMUST00000196761 198 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm42672-201ENSMUST00000197821 352 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm25482-201ENSMUST00000083225 107 ntBASIC2.41□□□□□ -2.02
Ift88Q61371 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.4□□□□□ -2.02
Ift88Q61371 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Ift88Q61371 Gm24121-201ENSMUST00000102029 106 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm24280-201ENSMUST00000104237 134 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm11471-201ENSMUST00000121824 198 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm14775-201ENSMUST00000122089 310 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm24594-201ENSMUST00000122502 99 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm25808-201ENSMUST00000122784 284 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm25939-201ENSMUST00000179876 191 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Mir7062-201ENSMUST00000185038 66 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm28282-201ENSMUST00000186072 186 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm37377-201ENSMUST00000191733 304 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.4□□□□□ -2.03
Ift88Q61371 Gm18546-201ENSMUST00000197245 676 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Ift88Q61371 Gm45150-201ENSMUST00000206051 467 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm44563-201ENSMUST00000207958 178 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Snora69-201ENSMUST00000083708 131 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm25410-201ENSMUST00000083758 137 ntBASIC2.4□□□□□ -2.03
Ift88Q61371 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Ift88Q61371 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.39□□□□□ -2.03
Ift88Q61371 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ift88Q61371 Gm15986-201ENSMUST00000122153 400 ntBASIC2.39□□□□□ -2.03
Ift88Q61371 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ift88Q61371 Gm23983-201ENSMUST00000157142 114 ntBASIC2.39□□□□□ -2.03
Ift88Q61371 Gm17113-201ENSMUST00000170118 171 ntBASIC2.39□□□□□ -2.03
Ift88Q61371 Gm25996-201ENSMUST00000175393 117 ntBASIC2.39□□□□□ -2.03
Ift88Q61371 Mir6993-201ENSMUST00000184912 65 ntBASIC2.39□□□□□ -2.03
Ift88Q61371 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Ift88Q61371 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ift88Q61371 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ift88Q61371 Gm24867-201ENSMUST00000104161 107 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 Gm23747-201ENSMUST00000104228 131 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 Gm6897-201ENSMUST00000117714 138 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 Gm14758-201ENSMUST00000119104 138 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 Gm11598-201ENSMUST00000119257 357 ntBASIC2.38□□□□□ -2.03
Ift88Q61371 Gm12771-201ENSMUST00000120246 135 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms