Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm17052-201ENSMUST00000165496 289 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.31□□□□□ -2.2
Usf1Q61069 Gm24510-201ENSMUST00000174965 94 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Mir1954-201ENSMUST00000175595 86 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.31□□□□□ -2.2
Usf1Q61069 Mir6351-201ENSMUST00000183826 99 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm27410-201ENSMUST00000183851 115 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm43472-201ENSMUST00000200175 154 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm44960-201ENSMUST00000207403 141 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm24356-201ENSMUST00000082859 106 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Mir200b-201ENSMUST00000083615 70 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.31□□□□□ -2.2
Usf1Q61069 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Usf1Q61069 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Usf1Q61069 Gm22780-201ENSMUST00000104084 132 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Snord71-201ENSMUST00000104361 85 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.3□□□□□ -2.2
Usf1Q61069 Gm23656-201ENSMUST00000122626 112 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Gm22791-201ENSMUST00000157232 145 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Gm23390-201ENSMUST00000157393 106 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Gm24174-201ENSMUST00000158933 111 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Gm27271-201ENSMUST00000183509 170 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Gm28453-203ENSMUST00000187041 189 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Gm20257-202ENSMUST00000188643 130 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Gm28912-201ENSMUST00000189001 234 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Gm43624-201ENSMUST00000197368 180 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Gm16976-205ENSMUST00000227324 226 ntBASIC1.3□□□□□ -2.2
Usf1Q61069 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Usf1Q61069 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Usf1Q61069 Gm25992-201ENSMUST00000102437 109 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC1.29□□□□□ -2.2
Usf1Q61069 Mir1b-201ENSMUST00000117012 122 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Gm11859-201ENSMUST00000118099 455 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Usf1Q61069 Gm23083-201ENSMUST00000157851 116 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Gm22315-201ENSMUST00000158010 143 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Gm23340-201ENSMUST00000158955 123 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Usf1Q61069 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Usf1Q61069 Gm27793-201ENSMUST00000183405 76 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Gm27317-201ENSMUST00000183533 95 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Usf1Q61069 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Gm22685-201ENSMUST00000082848 106 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.29□□□□□ -2.2
Usf1Q61069 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Usf1Q61069 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Usf1Q61069 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Usf1Q61069 Gm24342-201ENSMUST00000103907 104 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm25496-201ENSMUST00000104430 120 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm11798-201ENSMUST00000119150 421 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.28□□□□□ -2.2
Usf1Q61069 Gm22281-201ENSMUST00000157198 103 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm22447-201ENSMUST00000158155 92 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm24211-201ENSMUST00000158264 107 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm25434-201ENSMUST00000158278 167 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm24668-201ENSMUST00000158935 104 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm23636-201ENSMUST00000175070 95 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm27248-201ENSMUST00000184004 166 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm10105-201ENSMUST00000184601 270 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm27421-201ENSMUST00000184729 167 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm28414-201ENSMUST00000190111 294 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm23370-201ENSMUST00000199545 130 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm44962-201ENSMUST00000206460 279 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Usf1Q61069 Mir221-201ENSMUST00000083488 95 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.28□□□□□ -2.2
Usf1Q61069 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Usf1Q61069 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Usf1Q61069 Gm15526-201ENSMUST00000112504 204 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 Gm25541-201ENSMUST00000116888 126 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 Gm14923-201ENSMUST00000118270 155 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 Gm23170-201ENSMUST00000157158 106 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 Gm25970-201ENSMUST00000157165 86 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.27□□□□□ -2.21
Usf1Q61069 Gm17067-202ENSMUST00000180131 123 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 Gm44654-201ENSMUST00000208052 329 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 Gm44811-201ENSMUST00000209120 228 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.27□□□□□ -2.21
Usf1Q61069 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.26□□□□□ -2.21
Usf1Q61069 Gm25044-201ENSMUST00000158603 104 ntBASIC1.26□□□□□ -2.21
Usf1Q61069 Gm24677-201ENSMUST00000158755 150 ntBASIC1.26□□□□□ -2.21
Usf1Q61069 Gm29037-201ENSMUST00000189092 313 ntBASIC1.26□□□□□ -2.21
Usf1Q61069 Gm38050-201ENSMUST00000191904 238 ntBASIC1.26□□□□□ -2.21
Usf1Q61069 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.26□□□□□ -2.21
Usf1Q61069 Gm42506-201ENSMUST00000202009 150 ntBASIC1.26□□□□□ -2.21
Usf1Q61069 Gm44149-201ENSMUST00000204256 226 ntBASIC1.26□□□□□ -2.21
Usf1Q61069 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.26□□□□□ -2.21
Usf1Q61069 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.26□□□□□ -2.21
Usf1Q61069 Gm25357-201ENSMUST00000082745 72 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms