Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
ClpbQ60649 Gm42672-201ENSMUST00000197821 352 ntBASIC2.14□□□□□ -2.07
ClpbQ60649 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.14□□□□□ -2.07
ClpbQ60649 Gm26495-201ENSMUST00000083152 137 ntBASIC2.14□□□□□ -2.07
ClpbQ60649 Gm22866-201ENSMUST00000083947 177 ntBASIC2.14□□□□□ -2.07
ClpbQ60649 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm23492-201ENSMUST00000116837 115 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm11936-201ENSMUST00000118323 160 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm12512-201ENSMUST00000119620 217 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm22338-201ENSMUST00000157715 129 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm22258-201ENSMUST00000177645 94 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm26032-201ENSMUST00000178535 94 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm25210-201ENSMUST00000178813 94 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm25157-201ENSMUST00000178914 94 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm22046-201ENSMUST00000179027 94 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm22510-201ENSMUST00000179304 79 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm26336-201ENSMUST00000179449 79 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm24390-201ENSMUST00000179578 62 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm26390-201ENSMUST00000179628 79 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm22941-201ENSMUST00000179630 94 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm25471-201ENSMUST00000180126 94 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm37089-201ENSMUST00000195616 129 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Mir7118-201ENSMUST00000197760 61 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm45456-201ENSMUST00000210841 243 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Mir93-201ENSMUST00000083593 88 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.13□□□□□ -2.07
ClpbQ60649 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
ClpbQ60649 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
ClpbQ60649 Gm26154-201ENSMUST00000102339 96 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Mir767-201ENSMUST00000103256 107 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Gm26287-201ENSMUST00000158887 81 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Gm26157-201ENSMUST00000158974 126 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Gm16326-201ENSMUST00000162843 414 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Gm24510-201ENSMUST00000174965 94 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Gm25615-201ENSMUST00000177836 94 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Gm26435-201ENSMUST00000179026 107 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
ClpbQ60649 Gm28921-201ENSMUST00000190219 378 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Gm3724-201ENSMUST00000197957 349 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ClpbQ60649 Gm26493-201ENSMUST00000083155 136 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Gm23039-201ENSMUST00000083870 161 ntBASIC2.12□□□□□ -2.07
ClpbQ60649 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ClpbQ60649 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.12□□□□□ -2.07
ClpbQ60649 Gm24423-201ENSMUST00000101982 106 ntBASIC2.11□□□□□ -2.07
ClpbQ60649 Gm26135-201ENSMUST00000101993 72 ntBASIC2.11□□□□□ -2.07
ClpbQ60649 Gm14922-201ENSMUST00000121131 163 ntBASIC2.11□□□□□ -2.07
ClpbQ60649 Gm26150-201ENSMUST00000157426 151 ntBASIC2.11□□□□□ -2.07
ClpbQ60649 Snord50b-201ENSMUST00000178497 72 ntBASIC2.11□□□□□ -2.07
ClpbQ60649 Mir6540-201ENSMUST00000184886 108 ntBASIC2.11□□□□□ -2.07
ClpbQ60649 Gm43587-201ENSMUST00000199590 204 ntBASIC2.11□□□□□ -2.07
ClpbQ60649 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.11□□□□□ -2.07
ClpbQ60649 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.11□□□□□ -2.07
ClpbQ60649 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ClpbQ60649 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ClpbQ60649 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
ClpbQ60649 Gm23472-201ENSMUST00000101806 191 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm25321-201ENSMUST00000122558 102 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm16510-201ENSMUST00000153501 249 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm24900-201ENSMUST00000158128 134 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm17161-201ENSMUST00000169187 524 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm24497-201ENSMUST00000177868 191 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm25939-201ENSMUST00000179876 191 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm27545-201ENSMUST00000184755 202 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.1□□□□□ -2.07
ClpbQ60649 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm22358-201ENSMUST00000082877 122 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm23444-201ENSMUST00000082922 191 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Gm25188-201ENSMUST00000083913 122 ntBASIC2.1□□□□□ -2.07
ClpbQ60649 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ClpbQ60649 Gm24283-201ENSMUST00000104233 107 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Mir669d-201ENSMUST00000104644 121 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Mir344e-201ENSMUST00000104677 66 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
ClpbQ60649 Gm24333-201ENSMUST00000175101 84 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Gm44491-201ENSMUST00000196794 96 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Mir3961-201ENSMUST00000198795 59 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Mir7217-201ENSMUST00000200304 62 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Gm25130-201ENSMUST00000082650 156 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Gm25788-201ENSMUST00000082721 131 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Gm24536-201ENSMUST00000083144 107 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
ClpbQ60649 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.09□□□□□ -2.07
ClpbQ60649 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.09□□□□□ -2.08
ClpbQ60649 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
ClpbQ60649 Gm22750-201ENSMUST00000102076 103 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
ClpbQ60649 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm12721-201ENSMUST00000120621 268 ntBASIC2.08□□□□□ -2.08
ClpbQ60649 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.08□□□□□ -2.08
ClpbQ60649 Gm23090-201ENSMUST00000177331 78 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms