Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Trav8d-1Q5R1H8 Gm23622-201ENSMUST00000082460 107 ntBASIC0.35□□□□□ -2.35
Trav8d-1Q5R1H8 Gm24268-201ENSMUST00000082990 110 ntBASIC0.35□□□□□ -2.35
Trav8d-1Q5R1H8 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
Trav8d-1Q5R1H8 Gm26377-201ENSMUST00000102184 108 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Mir743b-201ENSMUST00000104751 77 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Gm13153-201ENSMUST00000120969 637 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22163-201ENSMUST00000158408 135 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Gm27624-201ENSMUST00000185047 177 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Gm37997-201ENSMUST00000193515 267 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Gm42719-201ENSMUST00000197393 355 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 CT009550.5-201ENSMUST00000226286 382 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Gm24623-201ENSMUST00000082616 194 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Gm24038-201ENSMUST00000082872 159 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Mir200b-201ENSMUST00000083615 70 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Gm24258-201ENSMUST00000083739 133 ntBASIC0.34□□□□□ -2.36
Trav8d-1Q5R1H8 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm23130-201ENSMUST00000104252 74 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm11334-201ENSMUST00000121969 156 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22279-201ENSMUST00000157200 93 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22796-201ENSMUST00000157234 106 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm23605-201ENSMUST00000157255 127 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm3027-201ENSMUST00000167579 451 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22308-201ENSMUST00000177609 107 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm28435-201ENSMUST00000185496 108 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm28414-201ENSMUST00000190111 294 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm44465-201ENSMUST00000199536 114 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm24707-201ENSMUST00000082812 107 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Gm25582-201ENSMUST00000083412 110 ntBASIC0.33□□□□□ -2.36
Trav8d-1Q5R1H8 Mir450-2-201ENSMUST00000102444 69 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 Gm25054-201ENSMUST00000157370 97 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22522-201ENSMUST00000158271 151 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 Gm44976-201ENSMUST00000205543 261 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22572-201ENSMUST00000082985 105 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 Gm24490-201ENSMUST00000083803 98 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.32□□□□□ -2.36
Trav8d-1Q5R1H8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22935-201ENSMUST00000103960 104 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22545-201ENSMUST00000104350 132 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm11859-201ENSMUST00000118099 455 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm14922-201ENSMUST00000121131 163 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm25884-201ENSMUST00000157782 62 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm26484-201ENSMUST00000158018 106 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Mir15a-201ENSMUST00000175266 84 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm26116-201ENSMUST00000175600 77 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm22851-201ENSMUST00000178741 94 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm25074-201ENSMUST00000178782 94 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Mir6364-201ENSMUST00000183396 86 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm29352-201ENSMUST00000188054 544 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm29350-201ENSMUST00000189141 541 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm17906-201ENSMUST00000202480 901 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm44282-201ENSMUST00000203199 190 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Mir16-2-201ENSMUST00000083672 95 ntBASIC0.31□□□□□ -2.36
Trav8d-1Q5R1H8 Gm23321-201ENSMUST00000104465 126 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Gm13577-201ENSMUST00000121365 205 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Mir7039-201ENSMUST00000183852 85 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Mir195b-201ENSMUST00000184814 97 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Gm44990-201ENSMUST00000203922 217 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 AC153968.2-201ENSMUST00000215579 1140 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 AC164629.1-201ENSMUST00000220250 1113 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Gm32300-201ENSMUST00000221735 515 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.3□□□□□ -2.36
Trav8d-1Q5R1H8 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm25378-201ENSMUST00000104333 129 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm13729-201ENSMUST00000120328 406 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm26149-201ENSMUST00000157432 108 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm24198-201ENSMUST00000157812 108 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Gm9593-201ENSMUST00000166034 469 ntBASIC0.29□□□□□ -2.36
Trav8d-1Q5R1H8 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms