Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm23924-201ENSMUST00000082474 108 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22749-201ENSMUST00000082490 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22747-201ENSMUST00000082495 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22063-201ENSMUST00000082560 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23057-201ENSMUST00000082801 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm26324-201ENSMUST00000083073 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24535-201ENSMUST00000083140 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm26127-201ENSMUST00000083193 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24456-201ENSMUST00000083198 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24018-201ENSMUST00000083232 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25577-201ENSMUST00000083414 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24861-201ENSMUST00000083459 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23103-201ENSMUST00000083725 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23732-201ENSMUST00000083751 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22352-201ENSMUST00000083917 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24448-201ENSMUST00000083979 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22886-201ENSMUST00000093714 107 ntBASIC0.34□□□□□ -2.36
Trav5d-4Q5R1F6 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22935-201ENSMUST00000103960 104 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm14922-201ENSMUST00000121131 163 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23672-201ENSMUST00000157471 107 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm27510-201ENSMUST00000158214 64 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm26173-201ENSMUST00000158416 136 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm26116-201ENSMUST00000175600 77 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24418-201ENSMUST00000177597 79 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm26285-201ENSMUST00000177923 107 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24639-201ENSMUST00000178518 79 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23076-201ENSMUST00000179082 79 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25077-201ENSMUST00000179157 79 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm28688-201ENSMUST00000187301 268 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm34783-201ENSMUST00000209159 303 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm11351-202ENSMUST00000225724 478 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23622-201ENSMUST00000082460 107 ntBASIC0.33□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24342-201ENSMUST00000103907 104 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22545-201ENSMUST00000104350 132 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Gm14884-201ENSMUST00000120456 196 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Gm3027-201ENSMUST00000167579 451 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Gm37997-201ENSMUST00000193515 267 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24623-201ENSMUST00000082616 194 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.32□□□□□ -2.36
Trav5d-4Q5R1F6 Gm11859-201ENSMUST00000118099 455 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Gm28661-201ENSMUST00000188231 681 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Gm28414-201ENSMUST00000190111 294 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Mir703-201ENSMUST00000197105 109 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Gm44462-201ENSMUST00000199696 129 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Gm32300-201ENSMUST00000221735 515 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22884-201ENSMUST00000083127 140 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Mir350-201ENSMUST00000083639 99 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Rny1-201ENSMUST00000083767 112 ntBASIC0.31□□□□□ -2.36
Trav5d-4Q5R1F6 Gm12433-201ENSMUST00000119659 255 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22308-201ENSMUST00000177609 107 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22851-201ENSMUST00000178741 94 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25074-201ENSMUST00000178782 94 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm38333-201ENSMUST00000193608 604 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm38268-201ENSMUST00000195813 193 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm44282-201ENSMUST00000203199 190 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm44921-201ENSMUST00000205290 301 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24625-201ENSMUST00000082622 130 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm24921-201ENSMUST00000083024 107 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Mir200b-201ENSMUST00000083615 70 ntBASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Trav5d-4Q5R1F6 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.29□□□□□ -2.36
Trav5d-4Q5R1F6 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Trav5d-4Q5R1F6 Gm25750-201ENSMUST00000175483 112 ntBASIC0.29□□□□□ -2.36
Trav5d-4Q5R1F6 Mir195b-201ENSMUST00000184814 97 ntBASIC0.29□□□□□ -2.36
Trav5d-4Q5R1F6 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Trav5d-4Q5R1F6 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Trav5d-4Q5R1F6 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22281-201ENSMUST00000157198 103 ntBASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 Gm22143-201ENSMUST00000157401 203 ntBASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 Gm27289-201ENSMUST00000183341 82 ntBASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 Gm27236-201ENSMUST00000184147 442 ntBASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 Gm28848-201ENSMUST00000189984 168 ntBASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 Gm44615-201ENSMUST00000206548 358 ntBASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 Gm44548-201ENSMUST00000208929 192 ntBASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.28□□□□□ -2.36
Trav5d-4Q5R1F6 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 Mir743b-201ENSMUST00000104751 77 ntBASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 Gm22945-201ENSMUST00000158557 157 ntBASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 Mir8116-201ENSMUST00000184134 97 ntBASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 Gm29352-201ENSMUST00000188054 544 ntBASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 Gm44392-201ENSMUST00000196758 115 ntBASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 Gm44828-201ENSMUST00000203745 106 ntBASIC0.27□□□□□ -2.37
Trav5d-4Q5R1F6 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms