Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm34015-201ENSMUST00000194908 451 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm44010-201ENSMUST00000204432 331 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm18113-201ENSMUST00000220630 303 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm10092-201ENSMUST00000077110 180 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm24150-201ENSMUST00000082759 104 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Mir872-201ENSMUST00000104728 81 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm23278-201ENSMUST00000157911 143 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Traj60-201ENSMUST00000167781 54 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Mir7j-201ENSMUST00000184427 122 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm37128-201ENSMUST00000192599 232 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Gm44301-201ENSMUST00000200362 143 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.82□□□□□ -2.28
Col27a1Q5QNQ9 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm26500-201ENSMUST00000101867 106 ntBASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Mir544-201ENSMUST00000103813 78 ntBASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm13396-201ENSMUST00000120617 271 ntBASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm23641-201ENSMUST00000157857 101 ntBASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm2962-201ENSMUST00000159266 336 ntBASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm29134-201ENSMUST00000186579 126 ntBASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm28337-201ENSMUST00000190425 666 ntBASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm31123-201ENSMUST00000192094 666 ntBASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm37089-201ENSMUST00000195616 129 ntBASIC0.81□□□□□ -2.28
Col27a1Q5QNQ9 Gm11386-201ENSMUST00000117761 347 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm24277-201ENSMUST00000158661 104 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm22263-201ENSMUST00000180060 104 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm26224-201ENSMUST00000082506 80 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm26164-201ENSMUST00000083793 104 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm24555-201ENSMUST00000104548 124 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm13967-201ENSMUST00000120404 380 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm13341-201ENSMUST00000120780 672 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm22482-201ENSMUST00000122563 359 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm27926-201ENSMUST00000157180 66 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm24668-201ENSMUST00000158935 104 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm20386-201ENSMUST00000174010 132 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm25586-201ENSMUST00000082499 112 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm24625-201ENSMUST00000082622 130 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm25801-201ENSMUST00000082638 106 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.8□□□□□ -2.28
Col27a1Q5QNQ9 Mir653-201ENSMUST00000102402 85 ntBASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 Mir743b-201ENSMUST00000104751 77 ntBASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 Gm25333-201ENSMUST00000158035 246 ntBASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 Gm17148-201ENSMUST00000164702 249 ntBASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 AC116465.1-201ENSMUST00000220324 235 ntBASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 Gm25683-201ENSMUST00000083940 131 ntBASIC0.79□□□□□ -2.28
Col27a1Q5QNQ9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Gm11857-201ENSMUST00000119817 324 ntBASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Gm24892-201ENSMUST00000122747 104 ntBASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Gm26149-201ENSMUST00000157432 108 ntBASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Gm25914-201ENSMUST00000157618 153 ntBASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Gm26405-201ENSMUST00000158495 100 ntBASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Gm25121-201ENSMUST00000179846 79 ntBASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Gm28848-201ENSMUST00000189984 168 ntBASIC0.78□□□□□ -2.28
Col27a1Q5QNQ9 Gm11522-201ENSMUST00000120533 176 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 Gm6985-201ENSMUST00000121255 271 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 Gm16265-201ENSMUST00000134558 108 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 Gm22281-201ENSMUST00000157198 103 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 Gm25486-201ENSMUST00000158726 63 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 Gm8219-201ENSMUST00000218309 242 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.78□□□□□ -2.29
Col27a1Q5QNQ9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Mir669f-201ENSMUST00000103850 121 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Gm23836-201ENSMUST00000104434 129 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Gm25052-201ENSMUST00000122661 158 ntBASIC0.77□□□□□ -2.29
Col27a1Q5QNQ9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms