Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.16□□□□□ -2.22
Clhc1Q5M6W3 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.16□□□□□ -2.22
Clhc1Q5M6W3 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.16□□□□□ -2.22
Clhc1Q5M6W3 Gm25128-201ENSMUST00000083339 76 ntBASIC1.16□□□□□ -2.22
Clhc1Q5M6W3 Gm25409-201ENSMUST00000083764 131 ntBASIC1.16□□□□□ -2.22
Clhc1Q5M6W3 Gm24588-201ENSMUST00000116696 83 ntBASIC1.15□□□□□ -2.23
Clhc1Q5M6W3 Gm43199-201ENSMUST00000200019 307 ntBASIC1.15□□□□□ -2.23
Clhc1Q5M6W3 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.15□□□□□ -2.23
Clhc1Q5M6W3 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Gm26074-201ENSMUST00000104063 129 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Gm25377-201ENSMUST00000104334 129 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Gm20144-201ENSMUST00000203031 165 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Gm45704-201ENSMUST00000212582 403 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Gm11351-202ENSMUST00000225724 478 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Mir211-201ENSMUST00000083651 106 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.14□□□□□ -2.23
Clhc1Q5M6W3 Gm26339-201ENSMUST00000102368 99 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Mir1b-201ENSMUST00000117012 122 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Gm22435-201ENSMUST00000158552 128 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Gm20462-201ENSMUST00000172623 408 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Gm9251-201ENSMUST00000197202 628 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Gm24261-201ENSMUST00000083744 104 ntBASIC1.13□□□□□ -2.23
Clhc1Q5M6W3 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm22656-201ENSMUST00000104199 171 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm24777-201ENSMUST00000157644 107 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Mir7091-201ENSMUST00000184075 79 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm28794-201ENSMUST00000185276 136 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm9227-201ENSMUST00000194733 566 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm24966-201ENSMUST00000082443 79 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm23055-201ENSMUST00000082805 94 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm24038-201ENSMUST00000082872 159 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm25789-201ENSMUST00000083294 76 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm25579-201ENSMUST00000083407 106 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 BC022960-201ENSMUST00000119987 1815 ntBASIC1.12□□□□□ -2.23
Clhc1Q5M6W3 Gm13967-201ENSMUST00000120404 380 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm11891-201ENSMUST00000121241 619 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm24808-201ENSMUST00000157993 118 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm24393-201ENSMUST00000158135 97 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm22447-201ENSMUST00000158155 92 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm26652-202ENSMUST00000181672 475 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm37399-201ENSMUST00000195224 416 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm42834-201ENSMUST00000196845 256 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm42719-201ENSMUST00000197393 355 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Mir3087-201ENSMUST00000199405 56 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm45268-201ENSMUST00000210046 370 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm24037-201ENSMUST00000082871 180 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.11□□□□□ -2.23
Clhc1Q5M6W3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Gm22551-201ENSMUST00000157795 103 ntBASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Gm26089-201ENSMUST00000157898 107 ntBASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Cfap61-214ENSMUST00000167179 183 ntBASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Mir5104-201ENSMUST00000175319 94 ntBASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Mir8090-201ENSMUST00000185078 136 ntBASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Gm43602-201ENSMUST00000196772 300 ntBASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Gm3867-201ENSMUST00000086108 279 ntBASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.1□□□□□ -2.23
Clhc1Q5M6W3 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Gm23013-201ENSMUST00000104146 106 ntBASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Gm22985-201ENSMUST00000122754 116 ntBASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Gm22279-201ENSMUST00000157200 93 ntBASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Mir3098-201ENSMUST00000175416 87 ntBASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Gm23267-201ENSMUST00000178490 132 ntBASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Gm23191-201ENSMUST00000179147 107 ntBASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Gm28992-201ENSMUST00000190534 139 ntBASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Gm44960-201ENSMUST00000207403 141 ntBASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.09□□□□□ -2.23
Clhc1Q5M6W3 Gm12770-201ENSMUST00000121734 462 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Gm25805-201ENSMUST00000122788 108 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Gm23083-201ENSMUST00000157851 116 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Gm2962-201ENSMUST00000159266 336 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Gm22403-201ENSMUST00000174919 84 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Gm23660-201ENSMUST00000178362 79 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Gm24088-201ENSMUST00000179100 79 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Gm26180-201ENSMUST00000179942 107 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Clhc1Q5M6W3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms