Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm22768-201ENSMUST00000158366 153 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm20477-201ENSMUST00000174028 280 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm26435-201ENSMUST00000179026 107 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm25253-201ENSMUST00000179958 107 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm28453-203ENSMUST00000187041 189 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm20144-201ENSMUST00000203031 165 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm35736-201ENSMUST00000203681 313 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm23625-201ENSMUST00000082457 100 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm24356-201ENSMUST00000082859 106 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Gm10360-201ENSMUST00000097219 272 ntBASIC1.41□□□□□ -2.18
Usp28Q5I043 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
Usp28Q5I043 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm9059-201ENSMUST00000118319 183 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm25318-201ENSMUST00000122554 314 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm23262-201ENSMUST00000158323 168 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm22114-201ENSMUST00000177756 107 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm26200-201ENSMUST00000180273 79 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm36891-201ENSMUST00000191995 655 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm44063-201ENSMUST00000203307 376 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm45207-201ENSMUST00000207469 145 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm5899-201ENSMUST00000071770 270 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm24355-201ENSMUST00000082858 122 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm24615-201ENSMUST00000083268 113 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm26107-201ENSMUST00000083972 107 ntBASIC1.4□□□□□ -2.19
Usp28Q5I043 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Usp28Q5I043 Gm25832-201ENSMUST00000104140 130 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm24632-201ENSMUST00000122770 323 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm26405-201ENSMUST00000158495 100 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm17052-201ENSMUST00000165496 289 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm23921-201ENSMUST00000175258 107 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm28288-201ENSMUST00000191019 214 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm37713-201ENSMUST00000191746 198 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm46997-201ENSMUST00000222108 217 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm11351-202ENSMUST00000225724 478 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm23412-201ENSMUST00000083017 107 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm23851-201ENSMUST00000083831 103 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.39□□□□□ -2.19
Usp28Q5I043 Gm24630-201ENSMUST00000122768 106 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm14298-201ENSMUST00000139032 237 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm16356-201ENSMUST00000143300 169 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm24262-201ENSMUST00000157431 144 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm22598-201ENSMUST00000157600 127 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm25371-201ENSMUST00000158162 101 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Rnu7-201ENSMUST00000158458 62 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm24638-201ENSMUST00000179807 132 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Mir7225-201ENSMUST00000184178 54 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm37404-201ENSMUST00000195726 359 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm45116-201ENSMUST00000207392 275 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm25078-201ENSMUST00000082530 107 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm24805-201ENSMUST00000082931 104 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Gm24163-201ENSMUST00000093660 132 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.38□□□□□ -2.19
Usp28Q5I043 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Usp28Q5I043 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Usp28Q5I043 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Usp28Q5I043 Mir374b-201ENSMUST00000102314 95 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm23336-201ENSMUST00000117023 123 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm25781-201ENSMUST00000122527 84 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm22281-201ENSMUST00000157198 103 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm23474-201ENSMUST00000158884 75 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm23355-201ENSMUST00000177614 107 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm25284-201ENSMUST00000180345 141 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm23148-201ENSMUST00000180367 107 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm37313-201ENSMUST00000191673 290 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm37338-201ENSMUST00000191986 127 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm37918-201ENSMUST00000192071 120 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm25258-201ENSMUST00000083049 107 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm25789-201ENSMUST00000083294 76 ntBASIC1.37□□□□□ -2.19
Usp28Q5I043 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm25848-201ENSMUST00000116790 144 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm15002-201ENSMUST00000118406 452 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm11572-201ENSMUST00000119164 120 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm23232-201ENSMUST00000157300 105 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm23854-201ENSMUST00000158378 108 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm25450-201ENSMUST00000179144 107 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm22510-201ENSMUST00000179304 79 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm26336-201ENSMUST00000179449 79 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm26390-201ENSMUST00000179628 79 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm27793-201ENSMUST00000183405 76 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Mir7683-201ENSMUST00000183842 61 ntBASIC1.36□□□□□ -2.19
Usp28Q5I043 Gm28418-201ENSMUST00000186179 423 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 150.3 ms