Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm12143-201ENSMUST00000119666 332 ntBASIC-0.95□□□□□ -2.56
Ccdc88bQ4QRL3 Gm11334-201ENSMUST00000121969 156 ntBASIC-0.95□□□□□ -2.56
Ccdc88bQ4QRL3 Gm29216-201ENSMUST00000187117 492 ntBASIC-0.95□□□□□ -2.56
Ccdc88bQ4QRL3 Gm28439-201ENSMUST00000187714 876 ntBASIC-0.95□□□□□ -2.56
Ccdc88bQ4QRL3 Mir327-201ENSMUST00000199328 69 ntBASIC-0.95□□□□□ -2.56
Ccdc88bQ4QRL3 AC154562.1-201ENSMUST00000226140 966 ntBASIC-0.95□□□□□ -2.56
Ccdc88bQ4QRL3 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.95□□□□□ -2.56
Ccdc88bQ4QRL3 Gm26018-201ENSMUST00000104406 128 ntBASIC-0.96□□□□□ -2.56
Ccdc88bQ4QRL3 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.96□□□□□ -2.56
Ccdc88bQ4QRL3 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.96□□□□□ -2.56
Ccdc88bQ4QRL3 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 Gm16373-201ENSMUST00000129517 303 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 Gm26195-201ENSMUST00000175035 101 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 Gm44870-201ENSMUST00000207291 357 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 Mir18-201ENSMUST00000083469 96 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 Gm25411-201ENSMUST00000083760 151 ntBASIC-0.97□□□□□ -2.56
Ccdc88bQ4QRL3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.98□□□□□ -2.57
Ccdc88bQ4QRL3 Gm15365-201ENSMUST00000122392 300 ntBASIC-0.98□□□□□ -2.57
Ccdc88bQ4QRL3 Gm15878-201ENSMUST00000127561 306 ntBASIC-0.98□□□□□ -2.57
Ccdc88bQ4QRL3 Trdv3-201ENSMUST00000198551 309 ntBASIC-0.98□□□□□ -2.57
Ccdc88bQ4QRL3 AC168056.1-201ENSMUST00000225270 180 ntBASIC-0.98□□□□□ -2.57
Ccdc88bQ4QRL3 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-0.98□□□□□ -2.57
Ccdc88bQ4QRL3 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.98□□□□□ -2.57
Ccdc88bQ4QRL3 Gm6568-201ENSMUST00000122274 697 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm25637-201ENSMUST00000157529 107 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm29640-201ENSMUST00000187972 278 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm44954-201ENSMUST00000208513 227 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm7495-201ENSMUST00000215099 426 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm45557-201ENSMUST00000210004 1651 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm18747-201ENSMUST00000198129 648 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Igkv13-82-201ENSMUST00000200308 346 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 AC153522.1-201ENSMUST00000220047 1090 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 CT030194.2-201ENSMUST00000225752 379 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm24977-201ENSMUST00000083106 163 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.99□□□□□ -2.57
Ccdc88bQ4QRL3 Gm14677-201ENSMUST00000117866 486 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 Gm14358-201ENSMUST00000118458 403 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 Gm24896-201ENSMUST00000122741 135 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 Mir1899-201ENSMUST00000122798 96 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 AC116465.1-201ENSMUST00000220324 235 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 AC154552.7-201ENSMUST00000222824 156 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 Gm22265-201ENSMUST00000082947 116 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 Gm3563-201ENSMUST00000172963 1628 ntBASIC-1□□□□□ -2.57
Ccdc88bQ4QRL3 Mir669o-201ENSMUST00000103898 96 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm23989-201ENSMUST00000117030 66 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm23206-201ENSMUST00000122720 184 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm24629-201ENSMUST00000122762 89 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm24480-201ENSMUST00000157442 103 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm23317-201ENSMUST00000157999 129 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm25328-201ENSMUST00000175013 107 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm22450-201ENSMUST00000179641 107 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 AC164612.2-202ENSMUST00000216314 253 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm32300-201ENSMUST00000221735 515 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm23614-201ENSMUST00000082598 107 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm24928-201ENSMUST00000083399 107 ntBASIC-1.01□□□□□ -2.57
Ccdc88bQ4QRL3 Gm24634-201ENSMUST00000158672 107 ntBASIC-1.02□□□□□ -2.57
Ccdc88bQ4QRL3 Gm25956-201ENSMUST00000175115 217 ntBASIC-1.02□□□□□ -2.57
Ccdc88bQ4QRL3 Gm45247-201ENSMUST00000210757 309 ntBASIC-1.02□□□□□ -2.57
Ccdc88bQ4QRL3 Gm5010-201ENSMUST00000213131 260 ntBASIC-1.02□□□□□ -2.57
Ccdc88bQ4QRL3 AC101677.1-201ENSMUST00000218590 158 ntBASIC-1.02□□□□□ -2.57
Ccdc88bQ4QRL3 Gm22981-201ENSMUST00000082611 75 ntBASIC-1.02□□□□□ -2.57
Ccdc88bQ4QRL3 Gm24116-201ENSMUST00000103975 107 ntBASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 Gm22221-201ENSMUST00000157362 103 ntBASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 Gm20415-201ENSMUST00000172877 423 ntBASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 Gm26335-201ENSMUST00000178449 107 ntBASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 Gm44988-201ENSMUST00000203835 1161 ntBASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 Gm43955-201ENSMUST00000204332 142 ntBASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 Gm45471-201ENSMUST00000211270 281 ntBASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 AC113305.1-201ENSMUST00000214664 724 ntBASIC-1.03□□□□□ -2.57
Ccdc88bQ4QRL3 Gm14417-201ENSMUST00000120036 1074 ntBASIC-1.04□□□□□ -2.58
Ccdc88bQ4QRL3 Gm13131-201ENSMUST00000122228 321 ntBASIC-1.04□□□□□ -2.58
Ccdc88bQ4QRL3 Gm28700-201ENSMUST00000187614 579 ntBASIC-1.04□□□□□ -2.58
Ccdc88bQ4QRL3 Gm19777-201ENSMUST00000191940 358 ntBASIC-1.04□□□□□ -2.58
Ccdc88bQ4QRL3 Trbv25-201ENSMUST00000194700 273 ntBASIC-1.04□□□□□ -2.58
Ccdc88bQ4QRL3 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
Ccdc88bQ4QRL3 Gm25136-201ENSMUST00000083253 115 ntBASIC-1.04□□□□□ -2.58
Ccdc88bQ4QRL3 Mir709-201ENSMUST00000102190 88 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm25783-201ENSMUST00000122525 190 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm22586-201ENSMUST00000157507 122 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Mir1966-201ENSMUST00000158807 108 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Snord8-201ENSMUST00000175303 110 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Gm24264-201ENSMUST00000179835 94 ntBASIC-1.05□□□□□ -2.58
Ccdc88bQ4QRL3 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms