Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm29661-201ENSMUST00000186781 315 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm29308-201ENSMUST00000188863 315 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm28288-201ENSMUST00000191019 214 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm43529-201ENSMUST00000199178 412 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm5023-201ENSMUST00000217442 587 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm22980-201ENSMUST00000082608 70 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm25475-201ENSMUST00000082825 180 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm27926-201ENSMUST00000157180 66 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm25371-201ENSMUST00000158162 101 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm24799-201ENSMUST00000178431 79 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm29397-201ENSMUST00000185205 333 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 CT485608.2-201ENSMUST00000227210 291 ntBASIC0.87□□□□□ -2.27
Spg11Q3UHA3 Gm24282-201ENSMUST00000104232 66 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm13378-201ENSMUST00000117483 336 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm22598-201ENSMUST00000157600 127 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm21754-201ENSMUST00000177550 479 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm25457-201ENSMUST00000179509 107 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Mir6355-201ENSMUST00000183687 106 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Spg11Q3UHA3 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm24091-201ENSMUST00000082550 83 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm23711-201ENSMUST00000083856 83 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Mir872-201ENSMUST00000104728 81 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm24895-201ENSMUST00000122742 74 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm17148-201ENSMUST00000164702 249 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm17100-201ENSMUST00000168963 272 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm24487-201ENSMUST00000178017 63 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm27624-201ENSMUST00000185047 177 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm18971-201ENSMUST00000197240 374 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Gm44282-201ENSMUST00000203199 190 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 CT033785.1-201ENSMUST00000224872 272 ntBASIC0.86□□□□□ -2.27
Spg11Q3UHA3 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm23656-201ENSMUST00000122626 112 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm22491-201ENSMUST00000157190 102 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm22337-201ENSMUST00000157721 132 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm25772-201ENSMUST00000158574 56 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm26159-201ENSMUST00000158968 104 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Mir28b-201ENSMUST00000175399 80 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm25284-201ENSMUST00000180345 141 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm27517-201ENSMUST00000184347 236 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm29005-201ENSMUST00000186773 320 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm25589-201ENSMUST00000082502 166 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm22620-201ENSMUST00000082700 133 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Mir743b-201ENSMUST00000104751 77 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm16242-201ENSMUST00000117741 334 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm22281-201ENSMUST00000157198 103 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm26149-201ENSMUST00000157432 108 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm22527-201ENSMUST00000158816 106 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm24813-201ENSMUST00000175310 84 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm9227-201ENSMUST00000194733 566 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm38060-201ENSMUST00000194822 464 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 AC120540.2-201ENSMUST00000221716 387 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Mir300-201ENSMUST00000083485 79 ntBASIC0.85□□□□□ -2.27
Spg11Q3UHA3 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Spg11Q3UHA3 Gm14392-201ENSMUST00000120332 401 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Gm14709-201ENSMUST00000121225 304 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Gm14413-201ENSMUST00000122158 408 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Gm22215-201ENSMUST00000157558 96 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Gm24726-201ENSMUST00000158232 121 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Gm27419-201ENSMUST00000184576 109 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Mir691-201ENSMUST00000199719 78 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Gm30155-201ENSMUST00000223458 339 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 AC121942.2-201ENSMUST00000223824 600 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Gm22685-201ENSMUST00000082848 106 ntBASIC0.84□□□□□ -2.27
Spg11Q3UHA3 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC0.84□□□□□ -2.28
Spg11Q3UHA3 Gm24079-201ENSMUST00000104352 132 ntBASIC0.84□□□□□ -2.28
Spg11Q3UHA3 Gm22021-201ENSMUST00000104353 107 ntBASIC0.84□□□□□ -2.28
Spg11Q3UHA3 Gm12255-201ENSMUST00000117184 284 ntBASIC0.84□□□□□ -2.28
Spg11Q3UHA3 Gm13672-201ENSMUST00000117554 459 ntBASIC0.84□□□□□ -2.28
Spg11Q3UHA3 Gm25269-201ENSMUST00000122601 104 ntBASIC0.84□□□□□ -2.28
Spg11Q3UHA3 Gm6956-201ENSMUST00000134724 546 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms