Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm7958-201ENSMUST00000178255 468 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm7950-201ENSMUST00000179633 468 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm26864-201ENSMUST00000181346 156 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm44373-201ENSMUST00000196112 169 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm45013-201ENSMUST00000206883 178 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.89□□□□□ -2.11
Brf2Q3UAW9 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm24164-201ENSMUST00000093663 104 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.89□□□□□ -2.11
Brf2Q3UAW9 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm23941-201ENSMUST00000101953 107 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm13714-201ENSMUST00000117313 221 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm13967-201ENSMUST00000120404 380 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm15861-201ENSMUST00000120979 339 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm23172-201ENSMUST00000157160 124 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm23181-201ENSMUST00000158685 110 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Mir7683-201ENSMUST00000183842 61 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Mir465d-201ENSMUST00000196314 58 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm29818-201ENSMUST00000218070 165 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm24316-201ENSMUST00000083041 107 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm24764-201ENSMUST00000083686 199 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Gm10360-201ENSMUST00000097219 272 ntBASIC1.88□□□□□ -2.11
Brf2Q3UAW9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Brf2Q3UAW9 Mir344e-201ENSMUST00000104677 66 ntBASIC1.87□□□□□ -2.11
Brf2Q3UAW9 Gm11794-201ENSMUST00000119446 237 ntBASIC1.87□□□□□ -2.11
Brf2Q3UAW9 Gm22315-201ENSMUST00000158010 143 ntBASIC1.87□□□□□ -2.11
Brf2Q3UAW9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.87□□□□□ -2.11
Brf2Q3UAW9 Gm28453-203ENSMUST00000187041 189 ntBASIC1.87□□□□□ -2.11
Brf2Q3UAW9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.87□□□□□ -2.11
Brf2Q3UAW9 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.87□□□□□ -2.11
Brf2Q3UAW9 Gm26447-201ENSMUST00000082448 129 ntBASIC1.87□□□□□ -2.11
Brf2Q3UAW9 Gm25130-201ENSMUST00000082650 156 ntBASIC1.87□□□□□ -2.11
Brf2Q3UAW9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Brf2Q3UAW9 Gm17161-201ENSMUST00000169187 524 ntBASIC1.86□□□□□ -2.11
Brf2Q3UAW9 Gm45616-201ENSMUST00000211711 319 ntBASIC1.86□□□□□ -2.11
Brf2Q3UAW9 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.86□□□□□ -2.11
Brf2Q3UAW9 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.86□□□□□ -2.11
Brf2Q3UAW9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Brf2Q3UAW9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm12941-201ENSMUST00000117934 220 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm23390-201ENSMUST00000157393 106 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm27723-201ENSMUST00000157398 63 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm26345-201ENSMUST00000157534 120 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm24277-201ENSMUST00000158661 104 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm27421-201ENSMUST00000184729 167 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm29657-201ENSMUST00000189807 342 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm42594-201ENSMUST00000199511 246 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Gm24151-201ENSMUST00000082758 141 ntBASIC1.85□□□□□ -2.11
Brf2Q3UAW9 Mir293-201ENSMUST00000104841 80 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 Gm23551-201ENSMUST00000116852 121 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 Gm11606-201ENSMUST00000120706 617 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 Gm15213-201ENSMUST00000122098 216 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 Gm22027-201ENSMUST00000122737 127 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.84□□□□□ -2.11
Brf2Q3UAW9 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.84□□□□□ -2.11
Brf2Q3UAW9 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Brf2Q3UAW9 Gm44938-201ENSMUST00000208614 427 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.84□□□□□ -2.11
Brf2Q3UAW9 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Brf2Q3UAW9 Mir767-201ENSMUST00000103256 107 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Gm12512-201ENSMUST00000119620 217 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Gm22883-201ENSMUST00000157376 106 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Gm22101-201ENSMUST00000157928 103 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Gm24847-201ENSMUST00000158032 108 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Mir6950-201ENSMUST00000184438 73 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.83□□□□□ -2.12
Brf2Q3UAW9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Brf2Q3UAW9 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Gm24858-201ENSMUST00000158058 323 ntBASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Gm24770-201ENSMUST00000158505 92 ntBASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Gm23963-201ENSMUST00000179603 77 ntBASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Gm27443-201ENSMUST00000184660 98 ntBASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Gm28912-201ENSMUST00000189001 234 ntBASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Brf2Q3UAW9 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.82□□□□□ -2.12
Brf2Q3UAW9 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Gm24460-201ENSMUST00000082731 106 ntBASIC1.82□□□□□ -2.12
Brf2Q3UAW9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 144.3 ms