Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Rnf40Q3U319 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Mir761-201ENSMUST00000103245 76 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm15272-201ENSMUST00000120865 233 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm22319-201ENSMUST00000157147 122 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm25572-201ENSMUST00000157527 172 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm25771-201ENSMUST00000158565 144 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm15796-201ENSMUST00000162135 204 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm24816-201ENSMUST00000175311 151 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm25933-201ENSMUST00000178943 108 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm24615-201ENSMUST00000083268 113 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm23247-201ENSMUST00000083373 107 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Rnf40Q3U319 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Rnf40Q3U319 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.87□□□□□ -1.79
Rnf40Q3U319 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.86□□□□□ -1.79
Rnf40Q3U319 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Rnf40Q3U319 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm23015-201ENSMUST00000104145 128 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm24281-201ENSMUST00000104234 136 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm13268-201ENSMUST00000117485 433 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm11566-201ENSMUST00000118550 203 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm16533-201ENSMUST00000140035 228 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm5963-201ENSMUST00000143451 236 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm23601-201ENSMUST00000157259 131 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm23588-201ENSMUST00000157659 99 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm22395-201ENSMUST00000177427 96 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Mir3620-201ENSMUST00000184710 61 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm44650-201ENSMUST00000206929 194 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm44666-201ENSMUST00000208544 391 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Snora41-201ENSMUST00000082668 132 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3.86□□□□□ -1.79
Rnf40Q3U319 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Rnf40Q3U319 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Rnf40Q3U319 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.86□□□□□ -1.79
Rnf40Q3U319 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.85□□□□□ -1.79
Rnf40Q3U319 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.85□□□□□ -1.79
Rnf40Q3U319 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Rnf40Q3U319 Gm22270-201ENSMUST00000104034 132 ntBASIC3.85□□□□□ -1.79
Rnf40Q3U319 Gm11356-201ENSMUST00000118974 192 ntBASIC3.85□□□□□ -1.79
Rnf40Q3U319 Gm12213-201ENSMUST00000119924 353 ntBASIC3.85□□□□□ -1.79
Rnf40Q3U319 Gm25769-201ENSMUST00000158569 127 ntBASIC3.85□□□□□ -1.79
Rnf40Q3U319 Gm27415-201ENSMUST00000183720 95 ntBASIC3.85□□□□□ -1.79
Rnf40Q3U319 Mir6996-201ENSMUST00000183922 61 ntBASIC3.85□□□□□ -1.79
Rnf40Q3U319 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.85□□□□□ -1.79
Rnf40Q3U319 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.85□□□□□ -1.79
Rnf40Q3U319 Gm14299-201ENSMUST00000117586 397 ntBASIC3.84□□□□□ -1.79
Rnf40Q3U319 Gm12190-201ENSMUST00000120001 187 ntBASIC3.84□□□□□ -1.79
Rnf40Q3U319 Gm15281-201ENSMUST00000125181 351 ntBASIC3.84□□□□□ -1.79
Rnf40Q3U319 Gm25887-201ENSMUST00000157777 84 ntBASIC3.84□□□□□ -1.79
Rnf40Q3U319 Gm23113-201ENSMUST00000158477 99 ntBASIC3.84□□□□□ -1.79
Rnf40Q3U319 Gm20693-201ENSMUST00000177431 211 ntBASIC3.84□□□□□ -1.79
Rnf40Q3U319 Gm27760-201ENSMUST00000185048 114 ntBASIC3.84□□□□□ -1.79
Rnf40Q3U319 Gm2189-201ENSMUST00000201419 429 ntBASIC3.84□□□□□ -1.79
Rnf40Q3U319 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC3.84□□□□□ -1.79
Rnf40Q3U319 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
Rnf40Q3U319 Gm43473-201ENSMUST00000200442 5997 ntBASIC3.83□□□□□ -1.8
Rnf40Q3U319 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.83□□□□□ -1.8
Rnf40Q3U319 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm23532-201ENSMUST00000104569 112 ntBASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm14687-201ENSMUST00000120206 363 ntBASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm24390-201ENSMUST00000179578 62 ntBASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm44824-201ENSMUST00000207021 229 ntBASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm23518-201ENSMUST00000082835 153 ntBASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm26326-201ENSMUST00000083070 129 ntBASIC3.83□□□□□ -1.8
Rnf40Q3U319 Gm26126-201ENSMUST00000083188 164 ntBASIC3.83□□□□□ -1.8
Rnf40Q3U319 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Rnf40Q3U319 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Rnf40Q3U319 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.82□□□□□ -1.8
Rnf40Q3U319 Mir374b-201ENSMUST00000102314 95 ntBASIC3.82□□□□□ -1.8
Rnf40Q3U319 Gm24171-201ENSMUST00000104126 131 ntBASIC3.82□□□□□ -1.8
Rnf40Q3U319 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf40Q3U319 Gm24573-201ENSMUST00000175499 112 ntBASIC3.82□□□□□ -1.8
Rnf40Q3U319 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC3.82□□□□□ -1.8
Rnf40Q3U319 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.82□□□□□ -1.8
Rnf40Q3U319 Gm25480-201ENSMUST00000083217 133 ntBASIC3.82□□□□□ -1.8
Rnf40Q3U319 Mir370-201ENSMUST00000083499 79 ntBASIC3.82□□□□□ -1.8
Rnf40Q3U319 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Rnf40Q3U319 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Rnf40Q3U319 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Rnf40Q3U319 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Rnf40Q3U319 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf40Q3U319 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Rnf40Q3U319 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.81□□□□□ -1.8
Rnf40Q3U319 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Rnf40Q3U319 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.81□□□□□ -1.8
Rnf40Q3U319 Gm12858-201ENSMUST00000121913 208 ntBASIC3.81□□□□□ -1.8
Rnf40Q3U319 Gm26036-201ENSMUST00000158149 144 ntBASIC3.81□□□□□ -1.8
Rnf40Q3U319 Gm22890-201ENSMUST00000158642 144 ntBASIC3.81□□□□□ -1.8
Rnf40Q3U319 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf40Q3U319 Gm29602-201ENSMUST00000186887 442 ntBASIC3.81□□□□□ -1.8
Rnf40Q3U319 Gm45456-201ENSMUST00000210841 243 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms