Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ddb1Q3U1J4 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.01□□□□□ -1.93
Ddb1Q3U1J4 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Ddb1Q3U1J4 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3□□□□□ -1.93
Ddb1Q3U1J4 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm45104-201ENSMUST00000208748 4350 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ddb1Q3U1J4 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm16032-201ENSMUST00000118534 168 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm6829-201ENSMUST00000119858 360 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm25012-201ENSMUST00000158396 164 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm26406-201ENSMUST00000158503 124 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm2962-201ENSMUST00000159266 336 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm19123-201ENSMUST00000190716 651 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm37037-201ENSMUST00000194475 424 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm26265-202ENSMUST00000196326 133 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ddb1Q3U1J4 AC114010.1-201ENSMUST00000222060 379 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm24163-201ENSMUST00000093660 132 ntBASIC3□□□□□ -1.93
Ddb1Q3U1J4 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ddb1Q3U1J4 Gm6954-201ENSMUST00000117416 225 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm13862-201ENSMUST00000121220 197 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm25945-201ENSMUST00000122484 135 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm23219-201ENSMUST00000158123 87 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm22947-201ENSMUST00000158559 91 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm25470-201ENSMUST00000175576 111 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Trbv18-201ENSMUST00000194256 294 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm24966-201ENSMUST00000082443 79 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm25589-201ENSMUST00000082502 166 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Mir410-201ENSMUST00000083563 81 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.99□□□□□ -1.93
Ddb1Q3U1J4 Gm22678-201ENSMUST00000116974 101 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm15162-201ENSMUST00000119325 283 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm22482-201ENSMUST00000122563 359 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm23980-201ENSMUST00000157135 158 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm22883-201ENSMUST00000157376 106 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm19901-201ENSMUST00000192191 495 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm44408-201ENSMUST00000200205 66 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm44533-201ENSMUST00000207782 268 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm45543-201ENSMUST00000209327 88 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm10092-201ENSMUST00000077110 180 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm24355-201ENSMUST00000082858 122 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm26495-201ENSMUST00000083152 137 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Gm24164-201ENSMUST00000093663 104 ntBASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ddb1Q3U1J4 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm12417-201ENSMUST00000119153 403 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm12926-201ENSMUST00000121158 409 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm25783-201ENSMUST00000122525 190 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm25615-201ENSMUST00000177836 94 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm27898-201ENSMUST00000183987 80 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm27421-201ENSMUST00000184729 167 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm29022-201ENSMUST00000190702 225 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm7214-201ENSMUST00000222428 272 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm22299-201ENSMUST00000082663 136 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.97□□□□□ -1.93
Ddb1Q3U1J4 Gm23653-201ENSMUST00000116751 97 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm11786-201ENSMUST00000120799 155 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm25059-201ENSMUST00000157367 117 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm22159-201ENSMUST00000158412 130 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm24006-201ENSMUST00000158462 132 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm17052-201ENSMUST00000165496 289 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm27330-201ENSMUST00000184689 132 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm44322-201ENSMUST00000196830 115 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm43993-201ENSMUST00000203972 247 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm18991-201ENSMUST00000209225 746 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm45654-201ENSMUST00000210980 123 ntBASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ddb1Q3U1J4 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Mir758-201ENSMUST00000103260 81 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm23578-201ENSMUST00000103943 104 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm24867-201ENSMUST00000104161 107 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm24907-201ENSMUST00000116932 128 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm23209-201ENSMUST00000158667 110 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm23002-201ENSMUST00000179221 107 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm29014-201ENSMUST00000191422 326 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm43220-201ENSMUST00000199299 282 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm24204-201ENSMUST00000082950 107 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm23039-201ENSMUST00000083870 161 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.95□□□□□ -1.94
Ddb1Q3U1J4 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.94□□□□□ -1.94
Ddb1Q3U1J4 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 346.7 ms