Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm38286-201ENSMUST00000195128 3105 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm23202-201ENSMUST00000104376 129 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm24601-201ENSMUST00000157970 143 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm22612-201ENSMUST00000158293 101 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm24877-201ENSMUST00000158779 116 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm22532-201ENSMUST00000158822 140 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm16289-201ENSMUST00000162079 183 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm17117-201ENSMUST00000163665 299 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm37037-201ENSMUST00000194475 424 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm44564-201ENSMUST00000207985 180 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm22686-201ENSMUST00000082847 100 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Snord61-201ENSMUST00000083176 71 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col8a1Q00780 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col8a1Q00780 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm42446-201ENSMUST00000199783 3284 ntBASIC2.72□□□□□ -1.97
Col8a1Q00780 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Col8a1Q00780 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col8a1Q00780 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col8a1Q00780 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col8a1Q00780 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col8a1Q00780 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
Col8a1Q00780 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Col8a1Q00780 Gm26011-201ENSMUST00000104410 104 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 Gm14536-201ENSMUST00000118324 138 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 Gm15027-201ENSMUST00000120922 138 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 Gm22490-201ENSMUST00000157188 119 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 Gm22281-201ENSMUST00000157198 103 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 Gm22560-201ENSMUST00000157332 120 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 Gm24358-201ENSMUST00000158424 288 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 Gm23817-201ENSMUST00000158449 104 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.71□□□□□ -1.98
Col8a1Q00780 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 Mir369-201ENSMUST00000083627 79 ntBASIC2.71□□□□□ -1.98
Col8a1Q00780 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col8a1Q00780 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Col8a1Q00780 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col8a1Q00780 Mir291a-201ENSMUST00000104815 82 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm25107-201ENSMUST00000122472 129 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm25623-201ENSMUST00000157216 108 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm23535-201ENSMUST00000157542 106 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm26084-201ENSMUST00000157903 104 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Mir1936-201ENSMUST00000158699 93 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm25364-201ENSMUST00000158851 107 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm23476-201ENSMUST00000158881 274 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm22500-201ENSMUST00000158982 99 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm23504-201ENSMUST00000158988 95 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Mir3106-201ENSMUST00000175401 82 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.7□□□□□ -1.98
Col8a1Q00780 Gm43264-201ENSMUST00000202284 325 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Mir137-201ENSMUST00000083635 73 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.7□□□□□ -1.98
Col8a1Q00780 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col8a1Q00780 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col8a1Q00780 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col8a1Q00780 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col8a1Q00780 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Gm23592-201ENSMUST00000157859 117 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Gm24388-201ENSMUST00000177872 107 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Gm25253-201ENSMUST00000179958 107 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Gm27648-201ENSMUST00000184315 107 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Mir7009-201ENSMUST00000184519 64 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.69□□□□□ -1.98
Col8a1Q00780 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Col8a1Q00780 Gm37428-201ENSMUST00000193886 137 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Gm19620-201ENSMUST00000195972 434 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Gm11351-202ENSMUST00000225724 478 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Gm23445-201ENSMUST00000082800 107 ntBASIC2.69□□□□□ -1.98
Col8a1Q00780 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.69□□□□□ -1.98
Col8a1Q00780 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm24937-201ENSMUST00000122597 134 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm27934-201ENSMUST00000158795 63 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm22708-201ENSMUST00000158987 103 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col8a1Q00780 Mir5118-201ENSMUST00000175551 67 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm27869-201ENSMUST00000184327 122 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm43324-201ENSMUST00000197482 289 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm22950-201ENSMUST00000082776 107 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm22683-201ENSMUST00000082854 137 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm22055-201ENSMUST00000083388 107 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.68□□□□□ -1.98
Col8a1Q00780 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Col8a1Q00780 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col8a1Q00780 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm22033-201ENSMUST00000116947 90 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm11644-201ENSMUST00000119735 150 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm15733-201ENSMUST00000132957 242 ntBASIC2.67□□□□□ -1.98
Col8a1Q00780 Gm23718-201ENSMUST00000157350 307 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms