Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm28831-201ENSMUST00000187739 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm28200-201ENSMUST00000187778 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm29034-201ENSMUST00000188099 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm28752-201ENSMUST00000188340 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm29378-201ENSMUST00000188723 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm28569-201ENSMUST00000188748 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm28120-201ENSMUST00000188812 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm28369-201ENSMUST00000188993 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm28537-201ENSMUST00000189026 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm28909-201ENSMUST00000189406 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm28861-201ENSMUST00000189681 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm29180-201ENSMUST00000190003 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm29575-201ENSMUST00000190597 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm29631-201ENSMUST00000191065 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm28160-201ENSMUST00000191229 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm29469-201ENSMUST00000191448 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm37129-201ENSMUST00000195791 315 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Ufd1P70362 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Ufd1P70362 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm16976-205ENSMUST00000227324 226 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Snord42a-201ENSMUST00000082606 65 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm25258-201ENSMUST00000083049 107 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm25578-201ENSMUST00000083406 104 ntBASIC1.25□□□□□ -2.21
Ufd1P70362 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Ufd1P70362 Gm23232-201ENSMUST00000157300 105 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 Gm22085-201ENSMUST00000158344 110 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 Gm26024-201ENSMUST00000158657 322 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 Gm24818-201ENSMUST00000175093 161 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 Gm25284-201ENSMUST00000180345 141 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Ufd1P70362 Gm27711-201ENSMUST00000183802 118 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 Gm23851-201ENSMUST00000083831 103 ntBASIC1.24□□□□□ -2.21
Ufd1P70362 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ufd1P70362 Mir653-201ENSMUST00000102402 85 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.23□□□□□ -2.21
Ufd1P70362 Gm16358-201ENSMUST00000146046 210 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 Gm29613-201ENSMUST00000185846 313 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 Gm29544-201ENSMUST00000188860 313 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 Gm28808-201ENSMUST00000190978 313 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 Gm19855-201ENSMUST00000210145 249 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 Gm10092-201ENSMUST00000077110 180 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 Snord14a-201ENSMUST00000082807 87 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 Gm25937-201ENSMUST00000083912 107 ntBASIC1.23□□□□□ -2.21
Ufd1P70362 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Ufd1P70362 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.23□□□□□ -2.21
Ufd1P70362 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Ufd1P70362 Gm25068-201ENSMUST00000103895 110 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm25376-201ENSMUST00000104340 133 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm14307-201ENSMUST00000118930 291 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm14297-201ENSMUST00000129110 291 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm16362-201ENSMUST00000135189 214 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm22215-201ENSMUST00000157558 96 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm23391-201ENSMUST00000157579 104 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm23779-201ENSMUST00000157938 64 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm24277-201ENSMUST00000158661 104 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Ufd1P70362 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.22□□□□□ -2.21
Ufd1P70362 Mir7675-201ENSMUST00000184262 58 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm36946-201ENSMUST00000192706 435 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.22□□□□□ -2.21
Ufd1P70362 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.22□□□□□ -2.21
Ufd1P70362 Gm24966-201ENSMUST00000082443 79 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm25078-201ENSMUST00000082530 107 ntBASIC1.22□□□□□ -2.21
Ufd1P70362 Gm26339-201ENSMUST00000102368 99 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Gm22021-201ENSMUST00000104353 107 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Gm11572-201ENSMUST00000119164 120 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Gm22099-201ENSMUST00000157925 123 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Gm23262-201ENSMUST00000158323 168 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Gm25671-201ENSMUST00000178612 105 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Gm23307-201ENSMUST00000179167 105 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Gm25286-201ENSMUST00000179790 105 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.21□□□□□ -2.22
Ufd1P70362 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Gm10264-201ENSMUST00000220589 429 ntBASIC1.21□□□□□ -2.22
Ufd1P70362 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Ufd1P70362 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
Ufd1P70362 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Ufd1P70362 Gm11834-201ENSMUST00000122257 585 ntBASIC1.2□□□□□ -2.22
Ufd1P70362 Gm14298-201ENSMUST00000139032 237 ntBASIC1.2□□□□□ -2.22
Ufd1P70362 Gm16356-201ENSMUST00000143300 169 ntBASIC1.2□□□□□ -2.22
Ufd1P70362 Gm23558-201ENSMUST00000157823 80 ntBASIC1.2□□□□□ -2.22
Ufd1P70362 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.2□□□□□ -2.22
Ufd1P70362 Gm27540-201ENSMUST00000184950 187 ntBASIC1.2□□□□□ -2.22
Ufd1P70362 Gm37089-201ENSMUST00000195616 129 ntBASIC1.2□□□□□ -2.22
Ufd1P70362 Gm44473-201ENSMUST00000204039 152 ntBASIC1.2□□□□□ -2.22
Ufd1P70362 Gm22294-201ENSMUST00000083308 104 ntBASIC1.2□□□□□ -2.22
Ufd1P70362 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Ufd1P70362 Gm23836-201ENSMUST00000104434 129 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Ufd1P70362 Gm12309-201ENSMUST00000119889 182 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm13967-201ENSMUST00000120404 380 ntBASIC1.19□□□□□ -2.22
Ufd1P70362 Gm22537-201ENSMUST00000158172 199 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 127.9 ms