Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm15529-201ENSMUST00000121833 994 ntBASIC0.17□□□□□ -2.38
Cux1P53564 Gm44921-201ENSMUST00000205290 301 ntBASIC0.17□□□□□ -2.38
Cux1P53564 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.17□□□□□ -2.38
Cux1P53564 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.17□□□□□ -2.38
Cux1P53564 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.17□□□□□ -2.38
Cux1P53564 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.17□□□□□ -2.38
Cux1P53564 Gm26326-201ENSMUST00000083070 129 ntBASIC0.17□□□□□ -2.38
Cux1P53564 Gm23422-201ENSMUST00000102000 107 ntBASIC0.16□□□□□ -2.38
Cux1P53564 Gm26303-201ENSMUST00000116845 119 ntBASIC0.16□□□□□ -2.38
Cux1P53564 Gm13967-201ENSMUST00000120404 380 ntBASIC0.16□□□□□ -2.38
Cux1P53564 Gm22962-201ENSMUST00000157962 73 ntBASIC0.16□□□□□ -2.38
Cux1P53564 Gm22983-201ENSMUST00000158308 104 ntBASIC0.16□□□□□ -2.38
Cux1P53564 Mir3079-201ENSMUST00000175428 90 ntBASIC0.16□□□□□ -2.38
Cux1P53564 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.16□□□□□ -2.38
Cux1P53564 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.16□□□□□ -2.38
Cux1P53564 Gm42719-201ENSMUST00000197393 355 ntBASIC0.16□□□□□ -2.38
Cux1P53564 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.16□□□□□ -2.38
Cux1P53564 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.16□□□□□ -2.38
Cux1P53564 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.15□□□□□ -2.38
Cux1P53564 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.15□□□□□ -2.38
Cux1P53564 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
Cux1P53564 Gm22757-201ENSMUST00000102279 96 ntBASIC0.15□□□□□ -2.39
Cux1P53564 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.15□□□□□ -2.39
Cux1P53564 Gm25108-201ENSMUST00000122473 78 ntBASIC0.15□□□□□ -2.39
Cux1P53564 Gm25413-201ENSMUST00000158544 312 ntBASIC0.15□□□□□ -2.39
Cux1P53564 Gm23777-201ENSMUST00000158994 259 ntBASIC0.15□□□□□ -2.39
Cux1P53564 Mir6365-201ENSMUST00000183990 101 ntBASIC0.15□□□□□ -2.39
Cux1P53564 Gm10193-201ENSMUST00000188288 231 ntBASIC0.15□□□□□ -2.39
Cux1P53564 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.15□□□□□ -2.39
Cux1P53564 Mir324-201ENSMUST00000083600 89 ntBASIC0.15□□□□□ -2.39
Cux1P53564 Gm14922-201ENSMUST00000121131 163 ntBASIC0.14□□□□□ -2.39
Cux1P53564 Gm27289-201ENSMUST00000183341 82 ntBASIC0.14□□□□□ -2.39
Cux1P53564 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.14□□□□□ -2.39
Cux1P53564 Gm24038-201ENSMUST00000082872 159 ntBASIC0.14□□□□□ -2.39
Cux1P53564 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.14□□□□□ -2.39
Cux1P53564 Gm24430-201ENSMUST00000104077 104 ntBASIC0.13□□□□□ -2.39
Cux1P53564 Gm7916-201ENSMUST00000120325 456 ntBASIC0.13□□□□□ -2.39
Cux1P53564 Gm24510-201ENSMUST00000174965 94 ntBASIC0.13□□□□□ -2.39
Cux1P53564 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.13□□□□□ -2.39
Cux1P53564 Gm34783-201ENSMUST00000209159 303 ntBASIC0.13□□□□□ -2.39
Cux1P53564 Gm25384-201ENSMUST00000157807 105 ntBASIC0.13□□□□□ -2.39
Cux1P53564 Gm24439-201ENSMUST00000157894 117 ntBASIC0.13□□□□□ -2.39
Cux1P53564 Gm19901-201ENSMUST00000192191 495 ntBASIC0.13□□□□□ -2.39
Cux1P53564 Gm37757-201ENSMUST00000193072 210 ntBASIC0.13□□□□□ -2.39
Cux1P53564 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.12□□□□□ -2.39
Cux1P53564 Gm9059-201ENSMUST00000118319 183 ntBASIC0.12□□□□□ -2.39
Cux1P53564 Gm14568-201ENSMUST00000119321 294 ntBASIC0.12□□□□□ -2.39
Cux1P53564 Gm27475-201ENSMUST00000183420 61 ntBASIC0.12□□□□□ -2.39
Cux1P53564 Mir7065-201ENSMUST00000185110 61 ntBASIC0.12□□□□□ -2.39
Cux1P53564 Gm20257-202ENSMUST00000188643 130 ntBASIC0.12□□□□□ -2.39
Cux1P53564 Gm45374-201ENSMUST00000211388 136 ntBASIC0.12□□□□□ -2.39
Cux1P53564 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Cux1P53564 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.12□□□□□ -2.39
Cux1P53564 Gm22575-201ENSMUST00000082981 110 ntBASIC0.12□□□□□ -2.39
Cux1P53564 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.11□□□□□ -2.39
Cux1P53564 Gm14269-201ENSMUST00000120455 306 ntBASIC0.11□□□□□ -2.39
Cux1P53564 Gm14846-201ENSMUST00000121868 216 ntBASIC0.11□□□□□ -2.39
Cux1P53564 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Cux1P53564 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.11□□□□□ -2.39
Cux1P53564 Gm25557-201ENSMUST00000158084 315 ntBASIC0.11□□□□□ -2.39
Cux1P53564 Gm43556-201ENSMUST00000196186 681 ntBASIC0.11□□□□□ -2.39
Cux1P53564 Gm44870-201ENSMUST00000207291 357 ntBASIC0.11□□□□□ -2.39
Cux1P53564 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.11□□□□□ -2.39
Cux1P53564 Gm25651-201ENSMUST00000083782 119 ntBASIC0.11□□□□□ -2.39
Cux1P53564 Gm11334-201ENSMUST00000121969 156 ntBASIC0.1□□□□□ -2.39
Cux1P53564 Gm25253-201ENSMUST00000179958 107 ntBASIC0.1□□□□□ -2.39
Cux1P53564 Gm42855-201ENSMUST00000197388 253 ntBASIC0.1□□□□□ -2.39
Cux1P53564 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Cux1P53564 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.1□□□□□ -2.39
Cux1P53564 Gm18113-201ENSMUST00000220630 303 ntBASIC0.1□□□□□ -2.39
Cux1P53564 Mir411-201ENSMUST00000083543 82 ntBASIC0.1□□□□□ -2.39
Cux1P53564 Gm22831-201ENSMUST00000102473 109 ntBASIC0.09□□□□□ -2.39
Cux1P53564 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.09□□□□□ -2.39
Cux1P53564 Gm25706-201ENSMUST00000157828 247 ntBASIC0.09□□□□□ -2.39
Cux1P53564 Gm22706-201ENSMUST00000157907 112 ntBASIC0.09□□□□□ -2.39
Cux1P53564 Gm22675-201ENSMUST00000158430 104 ntBASIC0.09□□□□□ -2.39
Cux1P53564 Gm20409-201ENSMUST00000173457 130 ntBASIC0.09□□□□□ -2.39
Cux1P53564 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.09□□□□□ -2.39
Cux1P53564 Gm45232-201ENSMUST00000207811 162 ntBASIC0.09□□□□□ -2.39
Cux1P53564 Gm32300-201ENSMUST00000221735 515 ntBASIC0.09□□□□□ -2.39
Cux1P53564 Gm11904-201ENSMUST00000120562 248 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm24559-201ENSMUST00000157519 121 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm3221-201ENSMUST00000164869 440 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.08□□□□□ -2.4
Cux1P53564 Gm25750-201ENSMUST00000175483 112 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Cux1P53564 Gm28661-201ENSMUST00000188231 681 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.08□□□□□ -2.4
Cux1P53564 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm22704-201ENSMUST00000083027 137 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm24523-201ENSMUST00000083965 132 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm24833-201ENSMUST00000116775 120 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm22337-201ENSMUST00000157721 132 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm25596-201ENSMUST00000178368 107 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm31520-201ENSMUST00000203048 733 ntBASIC0.08□□□□□ -2.4
Cux1P53564 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
Cux1P53564 Snord95-201ENSMUST00000082846 68 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Gm24256-201ENSMUST00000083696 84 ntBASIC0.08□□□□□ -2.4
Cux1P53564 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Cux1P53564 Gm26339-201ENSMUST00000102368 99 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms