Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ercc3P49135 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.45□□□□□ -2.02
Ercc3P49135 Mir875-201ENSMUST00000104698 78 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Gm12721-201ENSMUST00000120621 268 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Gm15281-201ENSMUST00000125181 351 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Gm16510-201ENSMUST00000153501 249 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Gm23048-201ENSMUST00000157237 129 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Gm44409-201ENSMUST00000198810 166 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Gm25141-201ENSMUST00000083177 107 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Gm23451-201ENSMUST00000083328 122 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Ercc3P49135 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.44□□□□□ -2.02
Ercc3P49135 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Ercc3P49135 Gm15215-201ENSMUST00000117773 489 ntBASIC2.43□□□□□ -2.02
Ercc3P49135 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.43□□□□□ -2.02
Ercc3P49135 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.43□□□□□ -2.02
Ercc3P49135 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.43□□□□□ -2.02
Ercc3P49135 Gm25371-201ENSMUST00000158162 101 ntBASIC2.43□□□□□ -2.02
Ercc3P49135 Gm38060-201ENSMUST00000194822 464 ntBASIC2.43□□□□□ -2.02
Ercc3P49135 Mir6375-201ENSMUST00000197176 95 ntBASIC2.43□□□□□ -2.02
Ercc3P49135 Mir376a-201ENSMUST00000197584 68 ntBASIC2.43□□□□□ -2.02
Ercc3P49135 Snord43-201ENSMUST00000199549 108 ntBASIC2.43□□□□□ -2.02
Ercc3P49135 Gm22972-201ENSMUST00000083297 131 ntBASIC2.43□□□□□ -2.02
Ercc3P49135 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Gm26156-201ENSMUST00000116999 123 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Gm24385-201ENSMUST00000122694 350 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Gm22338-201ENSMUST00000157715 129 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Gm24333-201ENSMUST00000175101 84 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Gm23090-201ENSMUST00000177331 78 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Gm27443-201ENSMUST00000184660 98 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Mir3569-201ENSMUST00000185080 58 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Gm22571-201ENSMUST00000082984 70 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Mir151-201ENSMUST00000083678 68 ntBASIC2.42□□□□□ -2.02
Ercc3P49135 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ercc3P49135 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm23015-201ENSMUST00000104145 128 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm25994-201ENSMUST00000175392 101 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm22258-201ENSMUST00000177645 94 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm26032-201ENSMUST00000178535 94 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm25210-201ENSMUST00000178813 94 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm25157-201ENSMUST00000178914 94 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm22046-201ENSMUST00000179027 94 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm24390-201ENSMUST00000179578 62 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm22941-201ENSMUST00000179630 94 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm25471-201ENSMUST00000180126 94 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm27271-201ENSMUST00000183509 170 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm37763-201ENSMUST00000193445 120 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm42834-201ENSMUST00000196845 256 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm43512-201ENSMUST00000198495 176 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm26379-202ENSMUST00000200225 132 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm20144-201ENSMUST00000203031 165 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm29818-201ENSMUST00000218070 165 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 AC154390.1-201ENSMUST00000225629 277 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm26497-201ENSMUST00000083146 107 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm25789-201ENSMUST00000083294 76 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Mir340-201ENSMUST00000083483 98 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm24163-201ENSMUST00000093660 132 ntBASIC2.41□□□□□ -2.02
Ercc3P49135 Gm23230-201ENSMUST00000157298 133 ntBASIC2.4□□□□□ -2.03
Ercc3P49135 Mir7026-201ENSMUST00000184384 67 ntBASIC2.4□□□□□ -2.03
Ercc3P49135 Mir7017-201ENSMUST00000184894 62 ntBASIC2.4□□□□□ -2.03
Ercc3P49135 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.4□□□□□ -2.03
Ercc3P49135 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.4□□□□□ -2.03
Ercc3P49135 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.4□□□□□ -2.03
Ercc3P49135 Gm22294-201ENSMUST00000083308 104 ntBASIC2.4□□□□□ -2.03
Ercc3P49135 Gm10222-201ENSMUST00000088336 294 ntBASIC2.4□□□□□ -2.03
Ercc3P49135 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.4□□□□□ -2.03
Ercc3P49135 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
Ercc3P49135 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.39□□□□□ -2.03
Ercc3P49135 Gm11786-201ENSMUST00000120799 155 ntBASIC2.39□□□□□ -2.03
Ercc3P49135 Gm25362-201ENSMUST00000158854 105 ntBASIC2.39□□□□□ -2.03
Ercc3P49135 Gm23977-201ENSMUST00000177871 74 ntBASIC2.39□□□□□ -2.03
Ercc3P49135 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.39□□□□□ -2.03
Ercc3P49135 Gm27747-201ENSMUST00000184707 85 ntBASIC2.39□□□□□ -2.03
Ercc3P49135 Gm27979-201ENSMUST00000185126 56 ntBASIC2.39□□□□□ -2.03
Ercc3P49135 Gm45150-201ENSMUST00000206051 467 ntBASIC2.39□□□□□ -2.03
Ercc3P49135 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Ercc3P49135 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ercc3P49135 Gm24079-201ENSMUST00000104352 132 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Gm14792-201ENSMUST00000119725 258 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Gm22281-201ENSMUST00000157198 103 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Gm22675-201ENSMUST00000158430 104 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Gm24177-201ENSMUST00000158927 131 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Gm23342-201ENSMUST00000158958 115 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Gm37918-201ENSMUST00000192071 120 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Ercc3P49135 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Gm25813-201ENSMUST00000082748 191 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Gm22683-201ENSMUST00000082854 137 ntBASIC2.38□□□□□ -2.03
Ercc3P49135 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ercc3P49135 Gm24098-201ENSMUST00000102075 109 ntBASIC2.37□□□□□ -2.03
Ercc3P49135 Gm25381-201ENSMUST00000102078 109 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms