Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm22418-201ENSMUST00000180326 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm29352-201ENSMUST00000188054 544 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm38395-201ENSMUST00000199904 830 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm44990-201ENSMUST00000203922 217 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm43898-201ENSMUST00000204456 424 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 AC153968.2-201ENSMUST00000215579 1140 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.51□□□□□ -2.33
Cdx2P43241 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm23629-201ENSMUST00000082465 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm23924-201ENSMUST00000082474 108 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm22749-201ENSMUST00000082490 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm22747-201ENSMUST00000082495 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm22063-201ENSMUST00000082560 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm23057-201ENSMUST00000082801 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm26324-201ENSMUST00000083073 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm24535-201ENSMUST00000083140 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm26127-201ENSMUST00000083193 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm24456-201ENSMUST00000083198 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm24018-201ENSMUST00000083232 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm25577-201ENSMUST00000083414 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm24861-201ENSMUST00000083459 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm23103-201ENSMUST00000083725 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm23732-201ENSMUST00000083751 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm25651-201ENSMUST00000083782 119 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm22352-201ENSMUST00000083917 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm24448-201ENSMUST00000083979 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 Gm22886-201ENSMUST00000093714 107 ntBASIC0.51□□□□□ -2.33
Cdx2P43241 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm26338-201ENSMUST00000102372 110 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm6272-201ENSMUST00000121256 171 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm25011-201ENSMUST00000158398 126 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Mir1936-201ENSMUST00000158699 93 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.5□□□□□ -2.33
Cdx2P43241 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm16404-201ENSMUST00000177739 468 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm7958-201ENSMUST00000178255 468 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Zfp950-206ENSMUST00000178819 171 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm7950-201ENSMUST00000179633 468 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm14598-201ENSMUST00000180109 468 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm14625-201ENSMUST00000180231 468 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Cdx2P43241 Gm26968-201ENSMUST00000182894 481 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm35212-201ENSMUST00000196672 606 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm43810-201ENSMUST00000201018 232 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Gm22578-201ENSMUST00000083730 107 ntBASIC0.5□□□□□ -2.33
Cdx2P43241 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Cdx2P43241 Mir293-201ENSMUST00000104841 80 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 Mir1197-201ENSMUST00000117037 120 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 Gm23672-201ENSMUST00000157471 107 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 Gm22851-201ENSMUST00000178741 94 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 Gm25074-201ENSMUST00000178782 94 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 Gm25253-201ENSMUST00000179958 107 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC0.49□□□□□ -2.33
Cdx2P43241 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 Gm24623-201ENSMUST00000082616 194 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 Mir33-201ENSMUST00000083531 69 ntBASIC0.49□□□□□ -2.33
Cdx2P43241 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Cdx2P43241 Gm11792-201ENSMUST00000120640 168 ntBASIC0.48□□□□□ -2.33
Cdx2P43241 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Cdx2P43241 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.48□□□□□ -2.33
Cdx2P43241 Gm26914-201ENSMUST00000182262 223 ntBASIC0.48□□□□□ -2.33
Cdx2P43241 Gm29350-201ENSMUST00000189141 541 ntBASIC0.48□□□□□ -2.33
Cdx2P43241 Gm8219-201ENSMUST00000218309 242 ntBASIC0.48□□□□□ -2.33
Cdx2P43241 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.48□□□□□ -2.33
Cdx2P43241 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.48□□□□□ -2.33
Cdx2P43241 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Cdx2P43241 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Cdx2P43241 Gm14007-201ENSMUST00000118288 210 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm22733-201ENSMUST00000158094 91 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm27510-201ENSMUST00000158214 64 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm37713-201ENSMUST00000191746 198 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm44396-201ENSMUST00000199843 114 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm17906-201ENSMUST00000202480 901 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm44449-201ENSMUST00000203610 153 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm18213-201ENSMUST00000207850 178 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm29817-201ENSMUST00000210098 172 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm25404-201ENSMUST00000082970 107 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm23093-201ENSMUST00000083450 102 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Cdx2P43241 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.47□□□□□ -2.33
Cdx2P43241 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.46□□□□□ -2.34
Cdx2P43241 Gm11334-201ENSMUST00000121969 156 ntBASIC0.46□□□□□ -2.34
Cdx2P43241 Gm22279-201ENSMUST00000157200 93 ntBASIC0.46□□□□□ -2.34
Cdx2P43241 Gm27545-201ENSMUST00000184755 202 ntBASIC0.46□□□□□ -2.34
Cdx2P43241 Gm28848-201ENSMUST00000189984 168 ntBASIC0.46□□□□□ -2.34
Cdx2P43241 Gm24311-201ENSMUST00000082570 104 ntBASIC0.46□□□□□ -2.34
Cdx2P43241 Gm24152-201ENSMUST00000082764 163 ntBASIC0.46□□□□□ -2.34
Cdx2P43241 Gm14922-201ENSMUST00000121131 163 ntBASIC0.45□□□□□ -2.34
Cdx2P43241 Gm24594-201ENSMUST00000122502 99 ntBASIC0.45□□□□□ -2.34
Cdx2P43241 Gm25375-201ENSMUST00000158157 135 ntBASIC0.45□□□□□ -2.34
Cdx2P43241 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.45□□□□□ -2.34
Cdx2P43241 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 259.4 ms