Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.6□□□□□ -2.51
HttP42859 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC-0.6□□□□□ -2.51
HttP42859 Gm42647-201ENSMUST00000195939 459 ntBASIC-0.6□□□□□ -2.51
HttP42859 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.6□□□□□ -2.51
HttP42859 Gm22886-201ENSMUST00000093714 107 ntBASIC-0.6□□□□□ -2.51
HttP42859 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-0.61□□□□□ -2.51
HttP42859 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC-0.61□□□□□ -2.51
HttP42859 Mir599-201ENSMUST00000102378 88 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm13343-201ENSMUST00000116474 105 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm24896-201ENSMUST00000122741 135 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm15274-201ENSMUST00000131442 291 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm21979-201ENSMUST00000139887 291 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm9498-201ENSMUST00000140849 291 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm15259-201ENSMUST00000151262 291 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm17655-201ENSMUST00000167969 255 ntBASIC-0.61□□□□□ -2.51
HttP42859 AC122905.2-201ENSMUST00000220325 269 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm38388-201ENSMUST00000195569 1430 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm22829-201ENSMUST00000083771 106 ntBASIC-0.61□□□□□ -2.51
HttP42859 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC-0.62□□□□□ -2.51
HttP42859 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm44429-201ENSMUST00000203542 186 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm45689-201ENSMUST00000210522 133 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.62□□□□□ -2.51
HttP42859 CT025689.4-201ENSMUST00000225926 601 ntBASIC-0.62□□□□□ -2.51
HttP42859 Mir324-201ENSMUST00000083600 89 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm26501-201ENSMUST00000178307 107 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm24565-201ENSMUST00000180099 107 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm46103-201ENSMUST00000217614 341 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm26265-201ENSMUST00000083277 135 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.62□□□□□ -2.51
HttP42859 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm23103-201ENSMUST00000083725 107 ntBASIC-0.62□□□□□ -2.51
HttP42859 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC-0.63□□□□□ -2.51
HttP42859 Gm24480-201ENSMUST00000157442 103 ntBASIC-0.63□□□□□ -2.51
HttP42859 Gm21978-201ENSMUST00000179696 377 ntBASIC-0.63□□□□□ -2.51
HttP42859 Gm37102-201ENSMUST00000195740 1105 ntBASIC-0.63□□□□□ -2.51
HttP42859 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-0.63□□□□□ -2.51
HttP42859 Gm22786-201ENSMUST00000104086 122 ntBASIC-0.63□□□□□ -2.51
HttP42859 Gm11859-201ENSMUST00000118099 455 ntBASIC-0.63□□□□□ -2.51
HttP42859 Gm12102-201ENSMUST00000118251 604 ntBASIC-0.63□□□□□ -2.51
HttP42859 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.63□□□□□ -2.51
HttP42859 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.63□□□□□ -2.51
HttP42859 Mir30a-201ENSMUST00000083471 71 ntBASIC-0.63□□□□□ -2.51
HttP42859 Gm26150-201ENSMUST00000157426 151 ntBASIC-0.64□□□□□ -2.51
HttP42859 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.64□□□□□ -2.51
HttP42859 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC-0.64□□□□□ -2.51
HttP42859 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.64□□□□□ -2.51
HttP42859 Gm6568-201ENSMUST00000122274 697 ntBASIC-0.64□□□□□ -2.51
HttP42859 Gm25914-201ENSMUST00000157618 153 ntBASIC-0.64□□□□□ -2.51
HttP42859 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC-0.64□□□□□ -2.51
HttP42859 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC-0.64□□□□□ -2.51
HttP42859 Gm44870-201ENSMUST00000207291 357 ntBASIC-0.64□□□□□ -2.51
HttP42859 Gm44825-201ENSMUST00000207557 150 ntBASIC-0.64□□□□□ -2.51
HttP42859 Gm44598-201ENSMUST00000207566 150 ntBASIC-0.64□□□□□ -2.51
HttP42859 Gm13603-201ENSMUST00000119404 83 ntBASIC-0.65□□□□□ -2.51
HttP42859 Gm11792-201ENSMUST00000120640 168 ntBASIC-0.65□□□□□ -2.51
HttP42859 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.65□□□□□ -2.51
HttP42859 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.65□□□□□ -2.51
HttP42859 Mir327-201ENSMUST00000199328 69 ntBASIC-0.65□□□□□ -2.51
HttP42859 Gm43914-201ENSMUST00000203592 594 ntBASIC-0.65□□□□□ -2.51
HttP42859 Gm23423-201ENSMUST00000082782 106 ntBASIC-0.65□□□□□ -2.51
HttP42859 Gm24668-201ENSMUST00000158935 104 ntBASIC-0.65□□□□□ -2.51
HttP42859 Gm9593-201ENSMUST00000166034 469 ntBASIC-0.65□□□□□ -2.51
HttP42859 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC-0.65□□□□□ -2.51
HttP42859 Mir3068-202ENSMUST00000197755 79 ntBASIC-0.65□□□□□ -2.51
HttP42859 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC-0.65□□□□□ -2.51
HttP42859 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
HttP42859 Gm23104-201ENSMUST00000083722 104 ntBASIC-0.65□□□□□ -2.51
HttP42859 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.66□□□□□ -2.51
HttP42859 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.66□□□□□ -2.51
HttP42859 AC159380.1-201ENSMUST00000218096 121 ntBASIC-0.66□□□□□ -2.51
HttP42859 AC154562.1-201ENSMUST00000226140 966 ntBASIC-0.66□□□□□ -2.51
HttP42859 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.66□□□□□ -2.52
HttP42859 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.66□□□□□ -2.52
HttP42859 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.66□□□□□ -2.52
HttP42859 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.66□□□□□ -2.52
HttP42859 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.66□□□□□ -2.52
HttP42859 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
HttP42859 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.67□□□□□ -2.52
HttP42859 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.67□□□□□ -2.52
HttP42859 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
HttP42859 Gm22810-201ENSMUST00000082741 158 ntBASIC-0.67□□□□□ -2.52
HttP42859 Gm22236-201ENSMUST00000157093 106 ntBASIC-0.67□□□□□ -2.52
HttP42859 Gm24409-201ENSMUST00000157881 152 ntBASIC-0.67□□□□□ -2.52
HttP42859 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.67□□□□□ -2.52
HttP42859 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC-0.67□□□□□ -2.52
HttP42859 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.67□□□□□ -2.52
HttP42859 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.67□□□□□ -2.52
HttP42859 AC113305.1-201ENSMUST00000214664 724 ntBASIC-0.67□□□□□ -2.52
HttP42859 Gm15365-201ENSMUST00000122392 300 ntBASIC-0.67□□□□□ -2.52
HttP42859 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC-0.67□□□□□ -2.52
HttP42859 Gm27599-201ENSMUST00000183758 174 ntBASIC-0.67□□□□□ -2.52
HttP42859 Gm22062-201ENSMUST00000082563 107 ntBASIC-0.67□□□□□ -2.52
HttP42859 Mir96-201ENSMUST00000083652 106 ntBASIC-0.67□□□□□ -2.52
HttP42859 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.68□□□□□ -2.52
HttP42859 Gm11065-201ENSMUST00000111462 228 ntBASIC-0.68□□□□□ -2.52
HttP42859 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms