Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Sox6P40645 Gm24865-201ENSMUST00000103246 96 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Sox6P40645 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Sox6P40645 Gm22027-201ENSMUST00000122737 127 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Gm25827-201ENSMUST00000157089 107 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Rnu7-201ENSMUST00000158458 62 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Mir1936-201ENSMUST00000158699 93 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Gm27493-201ENSMUST00000184128 78 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Gm9156-201ENSMUST00000189660 463 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Gm28717-201ENSMUST00000189950 315 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Gm28408-201ENSMUST00000191557 463 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Gm43035-201ENSMUST00000197626 517 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.24□□□□□ -2.21
Sox6P40645 Snord68-201ENSMUST00000082516 86 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Sox6P40645 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.24□□□□□ -2.21
Sox6P40645 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Sox6P40645 Gm14937-201ENSMUST00000119709 208 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm12785-201ENSMUST00000122052 172 ntBASIC1.23□□□□□ -2.21
Sox6P40645 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.23□□□□□ -2.21
Sox6P40645 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.23□□□□□ -2.21
Sox6P40645 Gm24915-201ENSMUST00000157288 78 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm25423-201ENSMUST00000157609 107 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm22537-201ENSMUST00000158172 199 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm22944-201ENSMUST00000158662 133 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm25284-201ENSMUST00000180345 141 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Sox6P40645 Mir7661-201ENSMUST00000197023 61 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm44010-201ENSMUST00000204432 331 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm45456-201ENSMUST00000210841 243 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm5023-201ENSMUST00000217442 587 ntBASIC1.23□□□□□ -2.21
Sox6P40645 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.23□□□□□ -2.21
Sox6P40645 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.23□□□□□ -2.21
Sox6P40645 Gm25636-201ENSMUST00000082666 133 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Snord14a-201ENSMUST00000082807 87 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm24355-201ENSMUST00000082858 122 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Gm23245-201ENSMUST00000083370 135 ntBASIC1.23□□□□□ -2.21
Sox6P40645 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.23□□□□□ -2.21
Sox6P40645 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Sox6P40645 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Sox6P40645 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.22□□□□□ -2.21
Sox6P40645 Gm26080-201ENSMUST00000104069 131 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm13992-201ENSMUST00000120558 156 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm24632-201ENSMUST00000122770 323 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm8121-201ENSMUST00000153583 499 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm22663-201ENSMUST00000158721 102 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm24737-201ENSMUST00000158861 100 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm17052-201ENSMUST00000165496 289 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm20462-201ENSMUST00000172623 408 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm24618-201ENSMUST00000177718 94 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm23953-201ENSMUST00000178214 94 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm26332-201ENSMUST00000179813 94 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm22863-201ENSMUST00000180265 94 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm28995-201ENSMUST00000186625 261 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm37399-201ENSMUST00000195224 416 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm43238-201ENSMUST00000196463 359 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Mir376a-201ENSMUST00000197584 68 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Mir3087-201ENSMUST00000199405 56 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm34783-201ENSMUST00000209159 303 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.22□□□□□ -2.21
Sox6P40645 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm10092-201ENSMUST00000077110 180 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm24043-201ENSMUST00000083108 116 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.22□□□□□ -2.21
Sox6P40645 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.22□□□□□ -2.21
Sox6P40645 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Gm9059-201ENSMUST00000118319 183 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Gm11254-201ENSMUST00000122368 653 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Gm23656-201ENSMUST00000122626 112 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Gm22080-201ENSMUST00000157591 106 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Gm23339-201ENSMUST00000158962 139 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Traj60-201ENSMUST00000167781 54 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Gm23793-201ENSMUST00000179396 117 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Gm29167-201ENSMUST00000190024 377 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Gm19123-201ENSMUST00000190716 651 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Sox6P40645 Gm43505-201ENSMUST00000200579 139 ntBASIC1.21□□□□□ -2.22
Sox6P40645 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.21□□□□□ -2.22
Sox6P40645 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.21□□□□□ -2.22
Sox6P40645 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Sox6P40645 Gm14906-201ENSMUST00000119265 390 ntBASIC1.2□□□□□ -2.22
Sox6P40645 Gm25805-201ENSMUST00000122788 108 ntBASIC1.2□□□□□ -2.22
Sox6P40645 Gm25914-201ENSMUST00000157618 153 ntBASIC1.2□□□□□ -2.22
Sox6P40645 Gm23208-201ENSMUST00000158666 127 ntBASIC1.2□□□□□ -2.22
Sox6P40645 Gm24668-201ENSMUST00000158935 104 ntBASIC1.2□□□□□ -2.22
Sox6P40645 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
Sox6P40645 Mir7675-201ENSMUST00000184262 58 ntBASIC1.2□□□□□ -2.22
Sox6P40645 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Sox6P40645 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.2□□□□□ -2.22
Sox6P40645 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Sox6P40645 Gm43250-201ENSMUST00000196536 273 ntBASIC1.2□□□□□ -2.22
Sox6P40645 Gm20144-201ENSMUST00000203031 165 ntBASIC1.2□□□□□ -2.22
Sox6P40645 Gm46997-201ENSMUST00000222108 217 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 150.5 ms