Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm24262-201ENSMUST00000157431 144 ntBASIC1.81□□□□□ -2.12
Traf1P39428 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.81□□□□□ -2.12
Traf1P39428 Gm24510-201ENSMUST00000174965 94 ntBASIC1.81□□□□□ -2.12
Traf1P39428 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Traf1P39428 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.81□□□□□ -2.12
Traf1P39428 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.81□□□□□ -2.12
Traf1P39428 Mir320-201ENSMUST00000083594 82 ntBASIC1.81□□□□□ -2.12
Traf1P39428 Mir293-201ENSMUST00000104841 80 ntBASIC1.8□□□□□ -2.12
Traf1P39428 Gm24504-201ENSMUST00000157679 100 ntBASIC1.8□□□□□ -2.12
Traf1P39428 Gm24902-201ENSMUST00000158126 123 ntBASIC1.8□□□□□ -2.12
Traf1P39428 Gm24174-201ENSMUST00000158933 111 ntBASIC1.8□□□□□ -2.12
Traf1P39428 Gm29229-201ENSMUST00000188874 323 ntBASIC1.8□□□□□ -2.12
Traf1P39428 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.8□□□□□ -2.12
Traf1P39428 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Traf1P39428 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.8□□□□□ -2.12
Traf1P39428 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.8□□□□□ -2.12
Traf1P39428 Gm13992-201ENSMUST00000120558 156 ntBASIC1.79□□□□□ -2.12
Traf1P39428 Gm23170-201ENSMUST00000157158 106 ntBASIC1.79□□□□□ -2.12
Traf1P39428 Gm24229-201ENSMUST00000158830 118 ntBASIC1.79□□□□□ -2.12
Traf1P39428 Gm24668-201ENSMUST00000158935 104 ntBASIC1.79□□□□□ -2.12
Traf1P39428 Gm23921-201ENSMUST00000175258 107 ntBASIC1.79□□□□□ -2.12
Traf1P39428 Gm23793-201ENSMUST00000179396 117 ntBASIC1.79□□□□□ -2.12
Traf1P39428 Gm27421-201ENSMUST00000184729 167 ntBASIC1.79□□□□□ -2.12
Traf1P39428 Gm28453-203ENSMUST00000187041 189 ntBASIC1.79□□□□□ -2.12
Traf1P39428 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.79□□□□□ -2.12
Traf1P39428 Gm23377-201ENSMUST00000082943 126 ntBASIC1.79□□□□□ -2.12
Traf1P39428 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Traf1P39428 Gm12512-201ENSMUST00000119620 217 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Gm12143-201ENSMUST00000119666 332 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Gm14980-201ENSMUST00000121247 736 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Traf1P39428 Gm22315-201ENSMUST00000158010 143 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Gm24677-201ENSMUST00000158755 150 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.78□□□□□ -2.12
Traf1P39428 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.78□□□□□ -2.12
Traf1P39428 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.78□□□□□ -2.12
Traf1P39428 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.78□□□□□ -2.12
Traf1P39428 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.78□□□□□ -2.12
Traf1P39428 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.78□□□□□ -2.12
Traf1P39428 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.78□□□□□ -2.12
Traf1P39428 Gm25936-201ENSMUST00000179952 114 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.78□□□□□ -2.12
Traf1P39428 Gm28794-201ENSMUST00000185276 136 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Gm23404-201ENSMUST00000082543 97 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Gm26493-201ENSMUST00000083155 136 ntBASIC1.78□□□□□ -2.12
Traf1P39428 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Traf1P39428 Gm22935-201ENSMUST00000103960 104 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Gm26080-201ENSMUST00000104069 131 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Gm23013-201ENSMUST00000104146 106 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Gm22945-201ENSMUST00000158557 157 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Gm27517-201ENSMUST00000184347 236 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Gm29037-201ENSMUST00000189092 313 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Gm28288-201ENSMUST00000191019 214 ntBASIC1.77□□□□□ -2.13
Traf1P39428 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Gm24355-201ENSMUST00000082858 122 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Gm22364-201ENSMUST00000083097 98 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Gm26329-201ENSMUST00000093723 110 ntBASIC1.77□□□□□ -2.13
Traf1P39428 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Traf1P39428 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.76□□□□□ -2.13
Traf1P39428 Gm25831-201ENSMUST00000158924 163 ntBASIC1.76□□□□□ -2.13
Traf1P39428 Gm25958-201ENSMUST00000175114 71 ntBASIC1.76□□□□□ -2.13
Traf1P39428 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Traf1P39428 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.76□□□□□ -2.13
Traf1P39428 Mir7661-201ENSMUST00000197023 61 ntBASIC1.76□□□□□ -2.13
Traf1P39428 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.76□□□□□ -2.13
Traf1P39428 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.76□□□□□ -2.13
Traf1P39428 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.76□□□□□ -2.13
Traf1P39428 Gm24163-201ENSMUST00000093660 132 ntBASIC1.76□□□□□ -2.13
Traf1P39428 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
Traf1P39428 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Traf1P39428 Gm25068-201ENSMUST00000103895 110 ntBASIC1.75□□□□□ -2.13
Traf1P39428 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Traf1P39428 Snord13-201ENSMUST00000157627 104 ntBASIC1.75□□□□□ -2.13
Traf1P39428 Gm29603-201ENSMUST00000186792 334 ntBASIC1.75□□□□□ -2.13
Traf1P39428 Gm28717-201ENSMUST00000189950 315 ntBASIC1.75□□□□□ -2.13
Traf1P39428 Gm37713-201ENSMUST00000191746 198 ntBASIC1.75□□□□□ -2.13
Traf1P39428 Gm37693-201ENSMUST00000194562 234 ntBASIC1.75□□□□□ -2.13
Traf1P39428 Gm38109-201ENSMUST00000195386 181 ntBASIC1.75□□□□□ -2.13
Traf1P39428 Gm5010-201ENSMUST00000213131 260 ntBASIC1.75□□□□□ -2.13
Traf1P39428 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.75□□□□□ -2.13
Traf1P39428 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.75□□□□□ -2.13
Traf1P39428 Snord14a-201ENSMUST00000082807 87 ntBASIC1.75□□□□□ -2.13
Traf1P39428 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.75□□□□□ -2.13
Traf1P39428 Gm25541-201ENSMUST00000116888 126 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Gm13518-201ENSMUST00000120018 233 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Gm43250-201ENSMUST00000196536 273 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Traf1P39428 Gm25820-201ENSMUST00000198589 127 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Gm43220-201ENSMUST00000199299 282 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Gm43976-201ENSMUST00000203637 235 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Gm44687-201ENSMUST00000204975 235 ntBASIC1.74□□□□□ -2.13
Traf1P39428 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Snord42a-201ENSMUST00000082606 65 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Gm25357-201ENSMUST00000082745 72 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Gm25578-201ENSMUST00000083406 104 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Gm25937-201ENSMUST00000083912 107 ntBASIC1.74□□□□□ -2.13
Traf1P39428 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.74□□□□□ -2.13
Traf1P39428 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms