Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm29818-201ENSMUST00000218070 165 ntBASIC2.12□□□□□ -2.07
Hoxc11P31313 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.12□□□□□ -2.07
Hoxc11P31313 Gm18617-201ENSMUST00000222311 259 ntBASIC2.12□□□□□ -2.07
Hoxc11P31313 Gm24661-201ENSMUST00000083205 104 ntBASIC2.12□□□□□ -2.07
Hoxc11P31313 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Hoxc11P31313 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Hoxc11P31313 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Hoxc11P31313 Gm26077-201ENSMUST00000104064 123 ntBASIC2.11□□□□□ -2.07
Hoxc11P31313 Gm24079-201ENSMUST00000104352 132 ntBASIC2.11□□□□□ -2.07
Hoxc11P31313 Gm11322-201ENSMUST00000118095 435 ntBASIC2.11□□□□□ -2.07
Hoxc11P31313 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.11□□□□□ -2.07
Hoxc11P31313 Gm23469-201ENSMUST00000157131 104 ntBASIC2.11□□□□□ -2.07
Hoxc11P31313 Gm22315-201ENSMUST00000158010 143 ntBASIC2.11□□□□□ -2.07
Hoxc11P31313 Gm26405-201ENSMUST00000158495 100 ntBASIC2.11□□□□□ -2.07
Hoxc11P31313 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.11□□□□□ -2.07
Hoxc11P31313 Gm28992-201ENSMUST00000190534 139 ntBASIC2.11□□□□□ -2.07
Hoxc11P31313 Gm26493-201ENSMUST00000083155 136 ntBASIC2.11□□□□□ -2.07
Hoxc11P31313 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Hoxc11P31313 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm22935-201ENSMUST00000103960 104 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm22494-201ENSMUST00000104495 128 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm23214-201ENSMUST00000122716 157 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm22027-201ENSMUST00000122737 127 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm24010-201ENSMUST00000157731 282 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm24510-201ENSMUST00000174965 94 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Mir376a-201ENSMUST00000197584 68 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm44909-201ENSMUST00000208756 165 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm24536-201ENSMUST00000083144 107 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Mir322-201ENSMUST00000083484 95 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.1□□□□□ -2.07
Hoxc11P31313 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.09□□□□□ -2.07
Hoxc11P31313 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm11606-201ENSMUST00000120706 617 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm14919-201ENSMUST00000120839 390 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm24851-201ENSMUST00000158028 103 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm22159-201ENSMUST00000158412 130 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.09□□□□□ -2.07
Hoxc11P31313 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm7958-201ENSMUST00000178255 468 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm7950-201ENSMUST00000179633 468 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm28453-203ENSMUST00000187041 189 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm44491-201ENSMUST00000196794 96 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm44320-201ENSMUST00000199276 86 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm26497-201ENSMUST00000083146 107 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Mir30d-201ENSMUST00000083503 82 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Snora69-201ENSMUST00000083708 131 ntBASIC2.09□□□□□ -2.07
Hoxc11P31313 Gm11794-201ENSMUST00000119446 237 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm24632-201ENSMUST00000122770 323 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm25910-201ENSMUST00000157620 140 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm24847-201ENSMUST00000158032 108 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm23854-201ENSMUST00000158378 108 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm23579-201ENSMUST00000158528 103 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm22075-201ENSMUST00000158599 192 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm23548-201ENSMUST00000158963 106 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm20477-201ENSMUST00000174028 280 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm27521-201ENSMUST00000184022 64 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm38060-201ENSMUST00000194822 464 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm45313-201ENSMUST00000210584 178 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm10222-201ENSMUST00000088336 294 ntBASIC2.08□□□□□ -2.08
Hoxc11P31313 Gm23951-201ENSMUST00000104029 132 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 Gm13714-201ENSMUST00000117313 221 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 Gm16510-201ENSMUST00000153501 249 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 Gm22321-201ENSMUST00000157152 104 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 Gm24900-201ENSMUST00000158128 134 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 Gm5900-201ENSMUST00000179862 375 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 Gm11351-202ENSMUST00000225724 478 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.07□□□□□ -2.08
Hoxc11P31313 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Hoxc11P31313 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm24098-201ENSMUST00000102075 109 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm25381-201ENSMUST00000102078 109 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm26479-201ENSMUST00000122620 106 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm24237-201ENSMUST00000157790 132 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm24858-201ENSMUST00000158058 323 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm16162-201ENSMUST00000162296 297 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm17161-201ENSMUST00000169187 524 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Mir6388-201ENSMUST00000184417 75 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Mir8090-201ENSMUST00000185078 136 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC2.06□□□□□ -2.08
Hoxc11P31313 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Mir222-201ENSMUST00000083537 79 ntBASIC2.06□□□□□ -2.08
Hoxc11P31313 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.05□□□□□ -2.08
Hoxc11P31313 Gm22883-201ENSMUST00000157376 106 ntBASIC2.05□□□□□ -2.08
Hoxc11P31313 Gm24769-201ENSMUST00000158506 129 ntBASIC2.05□□□□□ -2.08
Hoxc11P31313 Gm24277-201ENSMUST00000158661 104 ntBASIC2.05□□□□□ -2.08
Hoxc11P31313 Gm22093-201ENSMUST00000158980 111 ntBASIC2.05□□□□□ -2.08
Hoxc11P31313 Snord87-201ENSMUST00000175437 87 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 186.8 ms