Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm29575-201ENSMUST00000190597 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm29631-201ENSMUST00000191065 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm28160-201ENSMUST00000191229 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm29469-201ENSMUST00000191448 315 ntBASIC1.21□□□□□ -2.22
P20040 Gm37918-201ENSMUST00000192071 120 ntBASIC1.21□□□□□ -2.22
P20040 Gm37129-201ENSMUST00000195791 315 ntBASIC1.21□□□□□ -2.22
P20040 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.21□□□□□ -2.22
P20040 Gm45116-201ENSMUST00000207392 275 ntBASIC1.21□□□□□ -2.22
P20040 Gm22685-201ENSMUST00000082848 106 ntBASIC1.21□□□□□ -2.22
P20040 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.21□□□□□ -2.22
P20040 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
P20040 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.2□□□□□ -2.22
P20040 Gm11859-201ENSMUST00000118099 455 ntBASIC1.2□□□□□ -2.22
P20040 Gm22447-201ENSMUST00000158155 92 ntBASIC1.2□□□□□ -2.22
P20040 Gm24498-201ENSMUST00000158445 102 ntBASIC1.2□□□□□ -2.22
P20040 Mir7675-201ENSMUST00000184262 58 ntBASIC1.2□□□□□ -2.22
P20040 Gm19123-201ENSMUST00000190716 651 ntBASIC1.2□□□□□ -2.22
P20040 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
P20040 Gm20144-201ENSMUST00000203031 165 ntBASIC1.2□□□□□ -2.22
P20040 Gm5023-201ENSMUST00000217442 587 ntBASIC1.2□□□□□ -2.22
P20040 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.2□□□□□ -2.22
P20040 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.2□□□□□ -2.22
P20040 Gm26493-201ENSMUST00000083155 136 ntBASIC1.2□□□□□ -2.22
P20040 Gm22935-201ENSMUST00000103960 104 ntBASIC1.19□□□□□ -2.22
P20040 Gm25759-201ENSMUST00000103988 129 ntBASIC1.19□□□□□ -2.22
P20040 Gm12309-201ENSMUST00000119889 182 ntBASIC1.19□□□□□ -2.22
P20040 Gm25805-201ENSMUST00000122788 108 ntBASIC1.19□□□□□ -2.22
P20040 Gm26049-201ENSMUST00000157313 108 ntBASIC1.19□□□□□ -2.22
P20040 Gm27410-201ENSMUST00000183851 115 ntBASIC1.19□□□□□ -2.22
P20040 Gm28794-201ENSMUST00000185276 136 ntBASIC1.19□□□□□ -2.22
P20040 Gm45207-201ENSMUST00000207469 145 ntBASIC1.19□□□□□ -2.22
P20040 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.19□□□□□ -2.22
P20040 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.19□□□□□ -2.22
P20040 Gm26056-201ENSMUST00000083043 104 ntBASIC1.19□□□□□ -2.22
P20040 Gm25789-201ENSMUST00000083294 76 ntBASIC1.19□□□□□ -2.22
P20040 Gm11798-201ENSMUST00000119150 421 ntBASIC1.18□□□□□ -2.22
P20040 Gm12143-201ENSMUST00000119666 332 ntBASIC1.18□□□□□ -2.22
P20040 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
P20040 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.18□□□□□ -2.22
P20040 Gm22862-201ENSMUST00000178593 121 ntBASIC1.18□□□□□ -2.22
P20040 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
P20040 Gm27493-201ENSMUST00000184128 78 ntBASIC1.18□□□□□ -2.22
P20040 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.18□□□□□ -2.22
P20040 Gm42834-201ENSMUST00000196845 256 ntBASIC1.18□□□□□ -2.22
P20040 Gm44811-201ENSMUST00000209120 228 ntBASIC1.18□□□□□ -2.22
P20040 Gm11351-202ENSMUST00000225724 478 ntBASIC1.18□□□□□ -2.22
P20040 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.17□□□□□ -2.22
P20040 Gm24865-201ENSMUST00000103246 96 ntBASIC1.17□□□□□ -2.22
P20040 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
P20040 Gm25495-201ENSMUST00000104431 131 ntBASIC1.17□□□□□ -2.22
P20040 Gm23907-201ENSMUST00000104595 189 ntBASIC1.17□□□□□ -2.22
P20040 Gm11359-201ENSMUST00000120039 567 ntBASIC1.17□□□□□ -2.22
P20040 Gm14782-201ENSMUST00000120151 195 ntBASIC1.17□□□□□ -2.22
P20040 Gm22791-201ENSMUST00000157232 145 ntBASIC1.17□□□□□ -2.22
P20040 Traj60-201ENSMUST00000167781 54 ntBASIC1.17□□□□□ -2.22
P20040 Gm28409-201ENSMUST00000187064 103 ntBASIC1.17□□□□□ -2.22
P20040 Gm28927-201ENSMUST00000191528 272 ntBASIC1.17□□□□□ -2.22
P20040 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
P20040 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.17□□□□□ -2.22
P20040 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.17□□□□□ -2.22
P20040 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
P20040 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
P20040 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.16□□□□□ -2.22
P20040 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.16□□□□□ -2.22
P20040 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.16□□□□□ -2.22
P20040 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.16□□□□□ -2.22
P20040 Gm12512-201ENSMUST00000119620 217 ntBASIC1.16□□□□□ -2.22
P20040 Gm11857-201ENSMUST00000119817 324 ntBASIC1.16□□□□□ -2.22
P20040 Gm13992-201ENSMUST00000120558 156 ntBASIC1.16□□□□□ -2.22
P20040 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.16□□□□□ -2.22
P20040 Gm37089-201ENSMUST00000195616 129 ntBASIC1.16□□□□□ -2.22
P20040 Gm43472-201ENSMUST00000200175 154 ntBASIC1.16□□□□□ -2.22
P20040 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.16□□□□□ -2.22
P20040 Gm19855-201ENSMUST00000210145 249 ntBASIC1.16□□□□□ -2.22
P20040 Gm24355-201ENSMUST00000082858 122 ntBASIC1.16□□□□□ -2.22
P20040 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.16□□□□□ -2.22
P20040 Gm23142-201ENSMUST00000101848 105 ntBASIC1.15□□□□□ -2.23
P20040 Gm26240-201ENSMUST00000101893 105 ntBASIC1.15□□□□□ -2.23
P20040 Gm22559-201ENSMUST00000157329 134 ntBASIC1.15□□□□□ -2.23
P20040 Gm10105-201ENSMUST00000184601 270 ntBASIC1.15□□□□□ -2.23
P20040 Gm28992-201ENSMUST00000190534 139 ntBASIC1.15□□□□□ -2.23
P20040 Gm43624-201ENSMUST00000197368 180 ntBASIC1.15□□□□□ -2.23
P20040 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.15□□□□□ -2.23
P20040 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.15□□□□□ -2.23
P20040 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.15□□□□□ -2.23
P20040 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.15□□□□□ -2.23
P20040 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
P20040 Mir544-201ENSMUST00000103813 78 ntBASIC1.14□□□□□ -2.23
P20040 Gm23013-201ENSMUST00000104146 106 ntBASIC1.14□□□□□ -2.23
P20040 Gm23336-201ENSMUST00000117023 123 ntBASIC1.14□□□□□ -2.23
P20040 Gm15214-201ENSMUST00000122155 470 ntBASIC1.14□□□□□ -2.23
P20040 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.14□□□□□ -2.23
P20040 Snord13-201ENSMUST00000157627 104 ntBASIC1.14□□□□□ -2.23
P20040 Gm24499-201ENSMUST00000158446 104 ntBASIC1.14□□□□□ -2.23
P20040 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.14□□□□□ -2.23
P20040 Gm25038-201ENSMUST00000082928 130 ntBASIC1.14□□□□□ -2.23
P20040 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.13□□□□□ -2.23
P20040 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.13□□□□□ -2.23
P20040 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.13□□□□□ -2.23
P20040 Gm25970-201ENSMUST00000157165 86 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms