Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm22270-201ENSMUST00000104034 132 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm14709-201ENSMUST00000121225 304 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm15466-201ENSMUST00000122299 333 ntBASIC3.57□□□□□ -1.84
Msx1P13297 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.57□□□□□ -1.84
Msx1P13297 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.57□□□□□ -1.84
Msx1P13297 Gm23231-201ENSMUST00000157299 104 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm24008-201ENSMUST00000157733 138 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm24510-201ENSMUST00000174965 94 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Mir6402-201ENSMUST00000183406 80 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm27921-201ENSMUST00000183968 108 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.57□□□□□ -1.84
Msx1P13297 Gm44464-201ENSMUST00000198010 138 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm45456-201ENSMUST00000210841 243 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm5358-201ENSMUST00000212814 353 ntBASIC3.57□□□□□ -1.84
Msx1P13297 AC126939.1-201ENSMUST00000224943 226 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm22306-201ENSMUST00000082692 107 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm26126-201ENSMUST00000083188 164 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Gm22354-201ENSMUST00000083919 70 ntBASIC3.57□□□□□ -1.84
Msx1P13297 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Msx1P13297 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Msx1P13297 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Msx1P13297 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Msx1P13297 Gm8244-201ENSMUST00000121254 264 ntBASIC3.56□□□□□ -1.84
Msx1P13297 Gm24739-201ENSMUST00000158855 292 ntBASIC3.56□□□□□ -1.84
Msx1P13297 Mir7682-201ENSMUST00000198467 58 ntBASIC3.56□□□□□ -1.84
Msx1P13297 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.56□□□□□ -1.84
Msx1P13297 Gm25480-201ENSMUST00000083217 133 ntBASIC3.56□□□□□ -1.84
Msx1P13297 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Msx1P13297 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Msx1P13297 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.56□□□□□ -1.84
Msx1P13297 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.55□□□□□ -1.84
Msx1P13297 Mir374b-201ENSMUST00000102314 95 ntBASIC3.55□□□□□ -1.84
Msx1P13297 Mir673-201ENSMUST00000102361 91 ntBASIC3.55□□□□□ -1.84
Msx1P13297 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.55□□□□□ -1.84
Msx1P13297 Gm13314-201ENSMUST00000118742 335 ntBASIC3.55□□□□□ -1.84
Msx1P13297 Gm12213-201ENSMUST00000119924 353 ntBASIC3.55□□□□□ -1.84
Msx1P13297 Mir1934-201ENSMUST00000158127 83 ntBASIC3.55□□□□□ -1.84
Msx1P13297 Gm23858-201ENSMUST00000158384 106 ntBASIC3.55□□□□□ -1.84
Msx1P13297 Gm24390-201ENSMUST00000179578 62 ntBASIC3.55□□□□□ -1.84
Msx1P13297 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.55□□□□□ -1.84
Msx1P13297 AC136457.1-201ENSMUST00000224195 156 ntBASIC3.55□□□□□ -1.84
Msx1P13297 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.55□□□□□ -1.84
Msx1P13297 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.55□□□□□ -1.84
Msx1P13297 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Msx1P13297 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Msx1P13297 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.55□□□□□ -1.84
Msx1P13297 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Msx1P13297 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Msx1P13297 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Msx1P13297 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Msx1P13297 Gm24171-201ENSMUST00000104126 131 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Gm13885-201ENSMUST00000117569 187 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Gm26476-201ENSMUST00000122618 313 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Gm24913-201ENSMUST00000157286 107 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Gm24911-201ENSMUST00000157292 136 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Gm25888-201ENSMUST00000157778 302 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Gm22540-201ENSMUST00000158168 117 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Gm43901-201ENSMUST00000203247 453 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Gm44703-201ENSMUST00000205724 248 ntBASIC3.54□□□□□ -1.84
Msx1P13297 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Msx1P13297 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.54□□□□□ -1.84
Msx1P13297 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.54□□□□□ -1.84
Msx1P13297 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Mir155-201ENSMUST00000083463 65 ntBASIC3.54□□□□□ -1.84
Msx1P13297 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Msx1P13297 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Msx1P13297 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Msx1P13297 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Msx1P13297 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Msx1P13297 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Msx1P13297 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Msx1P13297 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.53□□□□□ -1.84
Msx1P13297 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.53□□□□□ -1.84
Msx1P13297 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.53□□□□□ -1.84
Msx1P13297 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Msx1P13297 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.53□□□□□ -1.84
Msx1P13297 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.53□□□□□ -1.84
Msx1P13297 Gm22796-201ENSMUST00000157234 106 ntBASIC3.53□□□□□ -1.84
Msx1P13297 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.53□□□□□ -1.84
Msx1P13297 Gm24573-201ENSMUST00000175499 112 ntBASIC3.53□□□□□ -1.84
Msx1P13297 Gm22638-201ENSMUST00000179674 107 ntBASIC3.53□□□□□ -1.84
Msx1P13297 Gm37001-201ENSMUST00000193377 190 ntBASIC3.53□□□□□ -1.84
Msx1P13297 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.53□□□□□ -1.84
Msx1P13297 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.53□□□□□ -1.84
Msx1P13297 Gm23790-201ENSMUST00000083013 107 ntBASIC3.53□□□□□ -1.84
Msx1P13297 AF357428-201ENSMUST00000083815 69 ntBASIC3.53□□□□□ -1.84
Msx1P13297 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.53□□□□□ -1.84
Msx1P13297 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.53□□□□□ -1.84
Msx1P13297 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.53□□□□□ -1.84
Msx1P13297 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Msx1P13297 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Msx1P13297 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Msx1P13297 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Msx1P13297 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.53□□□□□ -1.85
Msx1P13297 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Msx1P13297 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.52□□□□□ -1.85
Msx1P13297 Gm24096-201ENSMUST00000103905 110 ntBASIC3.52□□□□□ -1.85
Msx1P13297 Gm24598-201ENSMUST00000122510 74 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms