Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm44326-201ENSMUST00000198226 101 ntBASIC3.38□□□□□ -1.87
RaraP11416 Gm44256-201ENSMUST00000203304 335 ntBASIC3.38□□□□□ -1.87
RaraP11416 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.38□□□□□ -1.87
RaraP11416 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RaraP11416 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RaraP11416 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RaraP11416 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RaraP11416 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RaraP11416 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RaraP11416 Gm12954-201ENSMUST00000118610 611 ntBASIC3.37□□□□□ -1.87
RaraP11416 Gm25889-201ENSMUST00000157775 107 ntBASIC3.37□□□□□ -1.87
RaraP11416 Gm25882-201ENSMUST00000157784 85 ntBASIC3.37□□□□□ -1.87
RaraP11416 Mir3106-201ENSMUST00000175401 82 ntBASIC3.37□□□□□ -1.87
RaraP11416 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RaraP11416 Mir8096-201ENSMUST00000184526 127 ntBASIC3.37□□□□□ -1.87
RaraP11416 Gm44600-201ENSMUST00000208540 111 ntBASIC3.37□□□□□ -1.87
RaraP11416 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.37□□□□□ -1.87
RaraP11416 Gm23925-201ENSMUST00000082471 132 ntBASIC3.37□□□□□ -1.87
RaraP11416 Mir340-201ENSMUST00000083483 98 ntBASIC3.37□□□□□ -1.87
RaraP11416 Mir466-201ENSMUST00000093591 73 ntBASIC3.37□□□□□ -1.87
RaraP11416 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RaraP11416 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RaraP11416 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm23766-201ENSMUST00000103894 80 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm22270-201ENSMUST00000104034 132 ntBASIC3.36□□□□□ -1.87
RaraP11416 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm23324-201ENSMUST00000157421 131 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm22961-201ENSMUST00000157964 106 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.36□□□□□ -1.87
RaraP11416 Gm27893-201ENSMUST00000184408 194 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm28912-201ENSMUST00000189001 234 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm6801-201ENSMUST00000190697 339 ntBASIC3.36□□□□□ -1.87
RaraP11416 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm46233-201ENSMUST00000217831 449 ntBASIC3.36□□□□□ -1.87
RaraP11416 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm24147-201ENSMUST00000082763 144 ntBASIC3.36□□□□□ -1.87
RaraP11416 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.36□□□□□ -1.87
RaraP11416 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.36□□□□□ -1.87
RaraP11416 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RaraP11416 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.36□□□□□ -1.87
RaraP11416 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RaraP11416 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RaraP11416 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.35□□□□□ -1.87
RaraP11416 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RaraP11416 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RaraP11416 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RaraP11416 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm22115-201ENSMUST00000103976 133 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm23923-201ENSMUST00000104108 133 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm25272-201ENSMUST00000104293 128 ntBASIC3.35□□□□□ -1.87
RaraP11416 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm11285-201ENSMUST00000118443 322 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm11644-201ENSMUST00000119735 150 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm24747-201ENSMUST00000157835 87 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm22946-201ENSMUST00000158558 82 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm23504-201ENSMUST00000158988 95 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm25444-201ENSMUST00000158999 113 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm22070-201ENSMUST00000178475 107 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm25933-201ENSMUST00000178943 108 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm26435-201ENSMUST00000179026 107 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm18665-201ENSMUST00000189783 270 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm28169-201ENSMUST00000190342 345 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm37281-201ENSMUST00000192412 439 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.35□□□□□ -1.87
RaraP11416 Gm43901-201ENSMUST00000203247 453 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.35□□□□□ -1.87
RaraP11416 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RaraP11416 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm24977-201ENSMUST00000083106 163 ntBASIC3.35□□□□□ -1.87
RaraP11416 Gm22739-201ENSMUST00000083437 160 ntBASIC3.35□□□□□ -1.87
RaraP11416 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RaraP11416 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RaraP11416 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RaraP11416 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RaraP11416 Gm25407-201ENSMUST00000104102 134 ntBASIC3.34□□□□□ -1.87
RaraP11416 Gm13756-201ENSMUST00000117618 222 ntBASIC3.34□□□□□ -1.87
RaraP11416 Gm22380-201ENSMUST00000157479 95 ntBASIC3.34□□□□□ -1.87
RaraP11416 Gm24634-201ENSMUST00000158672 107 ntBASIC3.34□□□□□ -1.87
RaraP11416 Gm7258-201ENSMUST00000179317 300 ntBASIC3.34□□□□□ -1.87
RaraP11416 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.34□□□□□ -1.87
RaraP11416 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.34□□□□□ -1.87
RaraP11416 Gm44824-201ENSMUST00000207021 229 ntBASIC3.34□□□□□ -1.87
RaraP11416 Gm22979-201ENSMUST00000082609 159 ntBASIC3.34□□□□□ -1.87
RaraP11416 Gm24533-201ENSMUST00000083138 196 ntBASIC3.34□□□□□ -1.87
RaraP11416 Gm22972-201ENSMUST00000083297 131 ntBASIC3.34□□□□□ -1.87
RaraP11416 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RaraP11416 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
RaraP11416 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
RaraP11416 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
RaraP11416 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RaraP11416 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RaraP11416 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RaraP11416 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.33□□□□□ -1.88
RaraP11416 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RaraP11416 Gm22935-201ENSMUST00000103960 104 ntBASIC3.33□□□□□ -1.88
RaraP11416 Gm22212-201ENSMUST00000158096 106 ntBASIC3.33□□□□□ -1.88
RaraP11416 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RaraP11416 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.33□□□□□ -1.88
RaraP11416 Gm44024-201ENSMUST00000203008 476 ntBASIC3.33□□□□□ -1.88
RaraP11416 Gm44084-201ENSMUST00000203947 409 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 238.1 ms