Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm15115-201ENSMUST00000121145 264 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm23169-201ENSMUST00000157157 112 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm22233-201ENSMUST00000157464 114 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm23558-201ENSMUST00000157823 80 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm23221-201ENSMUST00000158118 93 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm25868-201ENSMUST00000158253 114 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm24221-201ENSMUST00000158833 313 ntBASIC1.35□□□□□ -2.19
Lire1P11260 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Lire1P11260 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.35□□□□□ -2.19
Lire1P11260 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Lire1P11260 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.35□□□□□ -2.19
Lire1P11260 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm24152-201ENSMUST00000082764 163 ntBASIC1.35□□□□□ -2.19
Lire1P11260 Gm22656-201ENSMUST00000104199 171 ntBASIC1.34□□□□□ -2.19
Lire1P11260 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Lire1P11260 Gm23435-201ENSMUST00000157183 156 ntBASIC1.34□□□□□ -2.19
Lire1P11260 Gm24174-201ENSMUST00000158933 111 ntBASIC1.34□□□□□ -2.19
Lire1P11260 Mir6346-201ENSMUST00000183982 81 ntBASIC1.34□□□□□ -2.19
Lire1P11260 Gm25789-201ENSMUST00000083294 76 ntBASIC1.34□□□□□ -2.19
Lire1P11260 Gm23041-201ENSMUST00000083868 106 ntBASIC1.34□□□□□ -2.19
Lire1P11260 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
Lire1P11260 Gm23060-201ENSMUST00000102345 109 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm22673-201ENSMUST00000104415 131 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Mir1b-201ENSMUST00000117012 122 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm23277-201ENSMUST00000157914 136 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Mir3061-201ENSMUST00000175129 91 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm24618-201ENSMUST00000177718 94 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm23953-201ENSMUST00000178214 94 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm26332-201ENSMUST00000179813 94 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm22863-201ENSMUST00000180265 94 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Mir8119-201ENSMUST00000183371 129 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm28257-201ENSMUST00000185244 463 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm20118-201ENSMUST00000187207 162 ntBASIC1.33□□□□□ -2.2
Lire1P11260 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm26224-201ENSMUST00000082506 80 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm23055-201ENSMUST00000082805 94 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Gm24356-201ENSMUST00000082859 106 ntBASIC1.33□□□□□ -2.2
Lire1P11260 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
Lire1P11260 Gm14922-201ENSMUST00000121131 163 ntBASIC1.32□□□□□ -2.2
Lire1P11260 Mir3968-201ENSMUST00000175355 100 ntBASIC1.32□□□□□ -2.2
Lire1P11260 Gm24020-201ENSMUST00000180156 108 ntBASIC1.32□□□□□ -2.2
Lire1P11260 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.32□□□□□ -2.2
Lire1P11260 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Gm12225-201ENSMUST00000117995 298 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Gm12143-201ENSMUST00000119666 332 ntBASIC1.31□□□□□ -2.2
Lire1P11260 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Gm22477-201ENSMUST00000122569 316 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Gm25663-201ENSMUST00000157698 135 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Gm26213-201ENSMUST00000158582 110 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Gm45119-201ENSMUST00000207612 199 ntBASIC1.31□□□□□ -2.2
Lire1P11260 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.31□□□□□ -2.2
Lire1P11260 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.31□□□□□ -2.2
Lire1P11260 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.31□□□□□ -2.2
Lire1P11260 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Gm25801-201ENSMUST00000082638 106 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.31□□□□□ -2.2
Lire1P11260 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Mir343-201ENSMUST00000102360 75 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Gm25274-201ENSMUST00000104296 135 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Gm14296-202ENSMUST00000108931 750 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Gm22228-201ENSMUST00000157364 101 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Gm23329-201ENSMUST00000157415 108 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Gm22435-201ENSMUST00000158552 128 ntBASIC1.3□□□□□ -2.2
Lire1P11260 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Mir5104-201ENSMUST00000175319 94 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Gm37399-201ENSMUST00000195224 416 ntBASIC1.3□□□□□ -2.2
Lire1P11260 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.3□□□□□ -2.2
Lire1P11260 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Lire1P11260 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.3□□□□□ -2.2
Lire1P11260 Gm13967-201ENSMUST00000120404 380 ntBASIC1.29□□□□□ -2.2
Lire1P11260 Gm26049-201ENSMUST00000157313 108 ntBASIC1.29□□□□□ -2.2
Lire1P11260 Mir3098-201ENSMUST00000175416 87 ntBASIC1.29□□□□□ -2.2
Lire1P11260 Mir7039-201ENSMUST00000183852 85 ntBASIC1.29□□□□□ -2.2
Lire1P11260 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.29□□□□□ -2.2
Lire1P11260 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.29□□□□□ -2.2
Lire1P11260 Snora41-201ENSMUST00000082668 132 ntBASIC1.29□□□□□ -2.2
Lire1P11260 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.28□□□□□ -2.2
Lire1P11260 Gm23122-201ENSMUST00000157645 103 ntBASIC1.28□□□□□ -2.2
Lire1P11260 Gm24808-201ENSMUST00000157993 118 ntBASIC1.28□□□□□ -2.2
Lire1P11260 Gm24154-201ENSMUST00000175261 130 ntBASIC1.28□□□□□ -2.2
Lire1P11260 Mir1954-201ENSMUST00000175595 86 ntBASIC1.28□□□□□ -2.2
Lire1P11260 Gm42719-201ENSMUST00000197393 355 ntBASIC1.28□□□□□ -2.2
Lire1P11260 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.28□□□□□ -2.2
Lire1P11260 Mir1904-201ENSMUST00000122702 80 ntBASIC1.27□□□□□ -2.21
Lire1P11260 Gm15899-201ENSMUST00000128586 238 ntBASIC1.27□□□□□ -2.21
Lire1P11260 Gm24277-201ENSMUST00000158661 104 ntBASIC1.27□□□□□ -2.21
Lire1P11260 Gm22136-201ENSMUST00000158751 268 ntBASIC1.27□□□□□ -2.21
Lire1P11260 Gm20462-201ENSMUST00000172623 408 ntBASIC1.27□□□□□ -2.21
Lire1P11260 Gm26652-202ENSMUST00000181672 475 ntBASIC1.27□□□□□ -2.21
Lire1P11260 Gm27420-201ENSMUST00000183823 79 ntBASIC1.27□□□□□ -2.21
Lire1P11260 Gm20144-201ENSMUST00000203031 165 ntBASIC1.27□□□□□ -2.21
Lire1P11260 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.27□□□□□ -2.21
Lire1P11260 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.27□□□□□ -2.21
Lire1P11260 Gm24035-201ENSMUST00000082867 107 ntBASIC1.27□□□□□ -2.21
Lire1P11260 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms