Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NefmP08553 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.84□□□□□ -2.11
NefmP08553 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.84□□□□□ -2.11
NefmP08553 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NefmP08553 Gm9059-201ENSMUST00000118319 183 ntBASIC1.84□□□□□ -2.11
NefmP08553 Gm11857-201ENSMUST00000119817 324 ntBASIC1.84□□□□□ -2.11
NefmP08553 Gm22485-201ENSMUST00000157990 109 ntBASIC1.84□□□□□ -2.11
NefmP08553 Gm22164-201ENSMUST00000158413 106 ntBASIC1.84□□□□□ -2.11
NefmP08553 Gm17067-202ENSMUST00000180131 123 ntBASIC1.84□□□□□ -2.11
NefmP08553 Mir211-201ENSMUST00000083651 106 ntBASIC1.84□□□□□ -2.11
NefmP08553 Gm24499-201ENSMUST00000158446 104 ntBASIC1.83□□□□□ -2.12
NefmP08553 Gm23339-201ENSMUST00000158962 139 ntBASIC1.83□□□□□ -2.12
NefmP08553 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.83□□□□□ -2.12
NefmP08553 Gm26200-201ENSMUST00000180273 79 ntBASIC1.83□□□□□ -2.12
NefmP08553 Gm18291-201ENSMUST00000190791 301 ntBASIC1.83□□□□□ -2.12
NefmP08553 Mir3087-201ENSMUST00000199405 56 ntBASIC1.83□□□□□ -2.12
NefmP08553 Gm23370-201ENSMUST00000199545 130 ntBASIC1.83□□□□□ -2.12
NefmP08553 Gm44811-201ENSMUST00000209120 228 ntBASIC1.83□□□□□ -2.12
NefmP08553 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NefmP08553 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.83□□□□□ -2.12
NefmP08553 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
NefmP08553 Traj60-201ENSMUST00000167781 54 ntBASIC1.82□□□□□ -2.12
NefmP08553 Gm23419-201ENSMUST00000175523 84 ntBASIC1.82□□□□□ -2.12
NefmP08553 Gm24618-201ENSMUST00000177718 94 ntBASIC1.82□□□□□ -2.12
NefmP08553 Gm23953-201ENSMUST00000178214 94 ntBASIC1.82□□□□□ -2.12
NefmP08553 Gm26332-201ENSMUST00000179813 94 ntBASIC1.82□□□□□ -2.12
NefmP08553 Gm22863-201ENSMUST00000180265 94 ntBASIC1.82□□□□□ -2.12
NefmP08553 Gm36953-201ENSMUST00000195295 268 ntBASIC1.82□□□□□ -2.12
NefmP08553 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.82□□□□□ -2.12
NefmP08553 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.82□□□□□ -2.12
NefmP08553 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.82□□□□□ -2.12
NefmP08553 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.82□□□□□ -2.12
NefmP08553 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.82□□□□□ -2.12
NefmP08553 Gm24625-201ENSMUST00000082622 130 ntBASIC1.82□□□□□ -2.12
NefmP08553 Gm24152-201ENSMUST00000082764 163 ntBASIC1.82□□□□□ -2.12
NefmP08553 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.82□□□□□ -2.12
NefmP08553 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.81□□□□□ -2.12
NefmP08553 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.81□□□□□ -2.12
NefmP08553 Gm25970-201ENSMUST00000157165 86 ntBASIC1.81□□□□□ -2.12
NefmP08553 Gm26049-201ENSMUST00000157313 108 ntBASIC1.81□□□□□ -2.12
NefmP08553 Gm7258-201ENSMUST00000179317 300 ntBASIC1.81□□□□□ -2.12
NefmP08553 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.81□□□□□ -2.12
NefmP08553 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.81□□□□□ -2.12
NefmP08553 Gm46997-201ENSMUST00000222108 217 ntBASIC1.81□□□□□ -2.12
NefmP08553 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.81□□□□□ -2.12
NefmP08553 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.8□□□□□ -2.12
NefmP08553 Gm23142-201ENSMUST00000101848 105 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm26240-201ENSMUST00000101893 105 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm22281-201ENSMUST00000157198 103 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm22791-201ENSMUST00000157232 145 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm24902-201ENSMUST00000158126 123 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm25831-201ENSMUST00000158924 163 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm17052-201ENSMUST00000165496 289 ntBASIC1.8□□□□□ -2.12
NefmP08553 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.8□□□□□ -2.12
NefmP08553 Gm28414-201ENSMUST00000190111 294 ntBASIC1.8□□□□□ -2.12
NefmP08553 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm22980-201ENSMUST00000082608 70 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm22685-201ENSMUST00000082848 106 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm26493-201ENSMUST00000083155 136 ntBASIC1.8□□□□□ -2.12
NefmP08553 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NefmP08553 Gm22447-201ENSMUST00000158155 92 ntBASIC1.79□□□□□ -2.12
NefmP08553 Gm22663-201ENSMUST00000158721 102 ntBASIC1.79□□□□□ -2.12
NefmP08553 Gm26363-201ENSMUST00000158866 83 ntBASIC1.79□□□□□ -2.12
NefmP08553 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NefmP08553 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.79□□□□□ -2.12
NefmP08553 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.79□□□□□ -2.12
NefmP08553 Gm25038-201ENSMUST00000082928 130 ntBASIC1.79□□□□□ -2.12
NefmP08553 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.79□□□□□ -2.12
NefmP08553 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.79□□□□□ -2.12
NefmP08553 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.78□□□□□ -2.12
NefmP08553 Gm26080-201ENSMUST00000104069 131 ntBASIC1.78□□□□□ -2.12
NefmP08553 Gm11798-201ENSMUST00000119150 421 ntBASIC1.78□□□□□ -2.12
NefmP08553 Gm37918-201ENSMUST00000192071 120 ntBASIC1.78□□□□□ -2.12
NefmP08553 Gm43624-201ENSMUST00000197368 180 ntBASIC1.78□□□□□ -2.12
NefmP08553 Gm44960-201ENSMUST00000207403 141 ntBASIC1.78□□□□□ -2.12
NefmP08553 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.78□□□□□ -2.12
NefmP08553 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NefmP08553 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.77□□□□□ -2.13
NefmP08553 Gm11859-201ENSMUST00000118099 455 ntBASIC1.77□□□□□ -2.13
NefmP08553 Gm25805-201ENSMUST00000122788 108 ntBASIC1.77□□□□□ -2.13
NefmP08553 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.77□□□□□ -2.13
NefmP08553 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.77□□□□□ -2.13
NefmP08553 Gm28409-201ENSMUST00000187064 103 ntBASIC1.77□□□□□ -2.13
NefmP08553 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.77□□□□□ -2.13
NefmP08553 Gm25636-201ENSMUST00000082666 133 ntBASIC1.77□□□□□ -2.13
NefmP08553 Gm24356-201ENSMUST00000082859 106 ntBASIC1.77□□□□□ -2.13
NefmP08553 Gm26056-201ENSMUST00000083043 104 ntBASIC1.77□□□□□ -2.13
NefmP08553 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
NefmP08553 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NefmP08553 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
NefmP08553 Gm42606-201ENSMUST00000114209 239 ntBASIC1.76□□□□□ -2.13
NefmP08553 Gm16399-201ENSMUST00000181423 219 ntBASIC1.76□□□□□ -2.13
NefmP08553 Gm28794-201ENSMUST00000185276 136 ntBASIC1.76□□□□□ -2.13
NefmP08553 Gm20144-201ENSMUST00000203031 165 ntBASIC1.76□□□□□ -2.13
NefmP08553 Gm5023-201ENSMUST00000217442 587 ntBASIC1.76□□□□□ -2.13
NefmP08553 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.76□□□□□ -2.13
NefmP08553 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.76□□□□□ -2.13
NefmP08553 Snord96a-201ENSMUST00000082791 81 ntBASIC1.76□□□□□ -2.13
NefmP08553 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.76□□□□□ -2.13
NefmP08553 Mir293-201ENSMUST00000104841 80 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms