Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.36□□□□□ -2.03
Col3a1P08121 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col3a1P08121 Gm25204-201ENSMUST00000082843 106 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Gm22683-201ENSMUST00000082854 137 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Gm25698-201ENSMUST00000082897 107 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Gm24611-201ENSMUST00000083272 107 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.36□□□□□ -2.03
Col3a1P08121 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col3a1P08121 Gm14894-201ENSMUST00000117170 270 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm14551-201ENSMUST00000120802 256 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm13210-201ENSMUST00000121483 273 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm15065-201ENSMUST00000121699 273 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm25115-201ENSMUST00000157187 140 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm24131-201ENSMUST00000158539 107 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col3a1P08121 Gm37449-201ENSMUST00000193016 270 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm18658-201ENSMUST00000195558 270 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm43676-201ENSMUST00000197532 540 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm43193-201ENSMUST00000197732 441 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm43978-201ENSMUST00000203491 451 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm25796-201ENSMUST00000082645 163 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm23138-201ENSMUST00000083365 103 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Mir302d-201ENSMUST00000083513 66 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.35□□□□□ -2.03
Col3a1P08121 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col3a1P08121 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col3a1P08121 Mir466p-201ENSMUST00000103925 89 ntBASIC2.34□□□□□ -2.03
Col3a1P08121 Gm24263-201ENSMUST00000104059 107 ntBASIC2.34□□□□□ -2.03
Col3a1P08121 Gm25728-201ENSMUST00000104525 159 ntBASIC2.34□□□□□ -2.03
Col3a1P08121 Gm25488-201ENSMUST00000158728 118 ntBASIC2.34□□□□□ -2.03
Col3a1P08121 Mir465d-201ENSMUST00000196314 58 ntBASIC2.34□□□□□ -2.03
Col3a1P08121 Gm18341-201ENSMUST00000197538 622 ntBASIC2.34□□□□□ -2.03
Col3a1P08121 Mir376a-201ENSMUST00000197584 68 ntBASIC2.34□□□□□ -2.03
Col3a1P08121 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Col3a1P08121 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.34□□□□□ -2.03
Col3a1P08121 Gm22353-201ENSMUST00000083918 136 ntBASIC2.34□□□□□ -2.03
Col3a1P08121 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Col3a1P08121 Gm13432-201ENSMUST00000118861 241 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.33□□□□□ -2.04
Col3a1P08121 Gm23584-201ENSMUST00000157655 129 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm24552-201ENSMUST00000158646 103 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm26291-201ENSMUST00000158889 137 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm37417-201ENSMUST00000195257 454 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.33□□□□□ -2.04
Col3a1P08121 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.33□□□□□ -2.04
Col3a1P08121 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm25815-201ENSMUST00000082755 107 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col3a1P08121 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col3a1P08121 Gm14537-201ENSMUST00000117464 599 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm23466-201ENSMUST00000157133 106 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm23956-201ENSMUST00000157211 119 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm22767-201ENSMUST00000158365 165 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm24799-201ENSMUST00000178431 79 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm29604-201ENSMUST00000187176 163 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.33□□□□□ -2.04
Col3a1P08121 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.33□□□□□ -2.04
Col3a1P08121 Mir1a-2-201ENSMUST00000198520 72 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm19244-201ENSMUST00000204340 253 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm44520-201ENSMUST00000205447 802 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Gm45445-201ENSMUST00000209586 232 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.33□□□□□ -2.04
Col3a1P08121 Gm24705-201ENSMUST00000082808 107 ntBASIC2.33□□□□□ -2.04
Col3a1P08121 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col3a1P08121 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col3a1P08121 Gm24116-201ENSMUST00000103975 107 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm12550-201ENSMUST00000118478 329 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm11253-201ENSMUST00000118486 201 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm14602-201ENSMUST00000118625 340 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm23183-201ENSMUST00000122595 323 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm17186-201ENSMUST00000171742 456 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm24084-201ENSMUST00000175173 137 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm23415-201ENSMUST00000175519 83 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm27477-201ENSMUST00000184649 143 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Mir7678-201ENSMUST00000185076 71 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm19901-201ENSMUST00000192191 495 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm37428-201ENSMUST00000193886 137 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Snord80-202ENSMUST00000199023 77 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm45907-201ENSMUST00000213023 193 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm23239-201ENSMUST00000083006 181 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Gm22294-201ENSMUST00000083308 104 ntBASIC2.32□□□□□ -2.04
Col3a1P08121 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Col3a1P08121 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.31□□□□□ -2.04
Col3a1P08121 Gm12238-201ENSMUST00000127764 124 ntBASIC2.31□□□□□ -2.04
Col3a1P08121 Mir1967-201ENSMUST00000157789 82 ntBASIC2.31□□□□□ -2.04
Col3a1P08121 Gm27544-201ENSMUST00000185069 155 ntBASIC2.31□□□□□ -2.04
Col3a1P08121 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.31□□□□□ -2.04
Col3a1P08121 Gm44657-201ENSMUST00000208568 450 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms