Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm24625-201ENSMUST00000082622 130 ntBASIC0.26□□□□□ -2.37
Hmgb3O54879 Gm22935-201ENSMUST00000103960 104 ntBASIC0.25□□□□□ -2.37
Hmgb3O54879 Gm26173-201ENSMUST00000158416 136 ntBASIC0.25□□□□□ -2.37
Hmgb3O54879 Gm28688-201ENSMUST00000187301 268 ntBASIC0.25□□□□□ -2.37
Hmgb3O54879 Gm29352-201ENSMUST00000188054 544 ntBASIC0.25□□□□□ -2.37
Hmgb3O54879 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.25□□□□□ -2.37
Hmgb3O54879 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.25□□□□□ -2.37
Hmgb3O54879 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.25□□□□□ -2.37
Hmgb3O54879 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.25□□□□□ -2.37
Hmgb3O54879 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.25□□□□□ -2.37
Hmgb3O54879 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Hmgb3O54879 Gm24258-201ENSMUST00000083739 133 ntBASIC0.25□□□□□ -2.37
Hmgb3O54879 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.24□□□□□ -2.37
Hmgb3O54879 Gm12837-201ENSMUST00000120131 373 ntBASIC0.24□□□□□ -2.37
Hmgb3O54879 Gm14846-201ENSMUST00000121868 216 ntBASIC0.24□□□□□ -2.37
Hmgb3O54879 Gm24476-201ENSMUST00000157437 131 ntBASIC0.24□□□□□ -2.37
Hmgb3O54879 Gm25884-201ENSMUST00000157782 62 ntBASIC0.24□□□□□ -2.37
Hmgb3O54879 Gm27510-201ENSMUST00000158214 64 ntBASIC0.24□□□□□ -2.37
Hmgb3O54879 Mir6389-201ENSMUST00000183661 102 ntBASIC0.24□□□□□ -2.37
Hmgb3O54879 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.24□□□□□ -2.37
Hmgb3O54879 Gm38333-201ENSMUST00000193608 604 ntBASIC0.24□□□□□ -2.37
Hmgb3O54879 Gm38268-201ENSMUST00000195813 193 ntBASIC0.24□□□□□ -2.37
Hmgb3O54879 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.24□□□□□ -2.37
Hmgb3O54879 Mir450-2-201ENSMUST00000102444 69 ntBASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm23011-201ENSMUST00000104148 132 ntBASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm11512-201ENSMUST00000119669 663 ntBASIC0.23□□□□□ -2.37
Hmgb3O54879 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm24963-201ENSMUST00000157916 144 ntBASIC0.23□□□□□ -2.37
Hmgb3O54879 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm27236-201ENSMUST00000184147 442 ntBASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm28848-201ENSMUST00000189984 168 ntBASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm28408-201ENSMUST00000191557 463 ntBASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.23□□□□□ -2.37
Hmgb3O54879 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm22572-201ENSMUST00000082985 105 ntBASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm24268-201ENSMUST00000082990 110 ntBASIC0.23□□□□□ -2.37
Hmgb3O54879 Gm26082-201ENSMUST00000104070 127 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Mir743b-201ENSMUST00000104751 77 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm14803-201ENSMUST00000117163 361 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm14568-201ENSMUST00000119321 294 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm22281-201ENSMUST00000157198 103 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm25393-201ENSMUST00000157336 285 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm21894-201ENSMUST00000179631 546 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm27793-201ENSMUST00000183405 76 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm20923-201ENSMUST00000190009 319 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm21088-201ENSMUST00000190875 316 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm44615-201ENSMUST00000206548 358 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm26326-201ENSMUST00000083070 129 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Mir101a-201ENSMUST00000083517 83 ntBASIC0.22□□□□□ -2.37
Hmgb3O54879 Gm14269-201ENSMUST00000120455 306 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 Gm25054-201ENSMUST00000157370 97 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 Gm25643-201ENSMUST00000158874 103 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 Gm44990-201ENSMUST00000203922 217 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 AC153968.2-201ENSMUST00000215579 1140 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 CT009550.5-201ENSMUST00000226286 382 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 Gm24707-201ENSMUST00000082812 107 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 Mir350-201ENSMUST00000083639 99 ntBASIC0.21□□□□□ -2.38
Hmgb3O54879 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Hmgb3O54879 Mir3079-201ENSMUST00000175428 90 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm27365-201ENSMUST00000184041 177 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Mir195b-201ENSMUST00000184814 97 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm29229-201ENSMUST00000188874 323 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm28921-201ENSMUST00000190219 378 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm45704-201ENSMUST00000212582 403 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm25138-201ENSMUST00000083248 136 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm24490-201ENSMUST00000083803 98 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm25513-201ENSMUST00000083861 162 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm24523-201ENSMUST00000083965 132 ntBASIC0.2□□□□□ -2.38
Hmgb3O54879 Gm25968-201ENSMUST00000157167 100 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm26149-201ENSMUST00000157432 108 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm26501-201ENSMUST00000178307 107 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm23269-201ENSMUST00000178701 107 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm29350-201ENSMUST00000189141 541 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm44392-201ENSMUST00000196758 115 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm44548-201ENSMUST00000208929 192 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm24966-201ENSMUST00000082443 79 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm23093-201ENSMUST00000083450 102 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm23731-201ENSMUST00000083749 107 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 Gm26314-201ENSMUST00000083891 107 ntBASIC0.19□□□□□ -2.38
Hmgb3O54879 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms