Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Sdc4O35988 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.43□□□□□ -2.34
Sdc4O35988 Gm43432-201ENSMUST00000196352 121 ntBASIC0.43□□□□□ -2.34
Sdc4O35988 Gm44465-201ENSMUST00000199536 114 ntBASIC0.43□□□□□ -2.34
Sdc4O35988 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC0.43□□□□□ -2.34
Sdc4O35988 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.43□□□□□ -2.34
Sdc4O35988 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.43□□□□□ -2.34
Sdc4O35988 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.43□□□□□ -2.34
Sdc4O35988 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
Sdc4O35988 Gm22759-201ENSMUST00000102276 96 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm25876-201ENSMUST00000104329 119 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm6272-201ENSMUST00000121256 171 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm15529-201ENSMUST00000121833 994 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm14713-201ENSMUST00000122362 686 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm23981-201ENSMUST00000157136 106 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm25384-201ENSMUST00000157807 105 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm22654-201ENSMUST00000157874 105 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm27510-201ENSMUST00000158214 64 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Mir1936-201ENSMUST00000158699 93 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm16546-201ENSMUST00000159442 355 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm28414-201ENSMUST00000190111 294 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm28926-201ENSMUST00000191063 680 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm44337-201ENSMUST00000196553 114 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm18213-201ENSMUST00000207850 178 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC0.42□□□□□ -2.34
Sdc4O35988 Gm24623-201ENSMUST00000082616 194 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Mir362-201ENSMUST00000093592 65 ntBASIC0.42□□□□□ -2.34
Sdc4O35988 Gm14884-201ENSMUST00000120456 196 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Sdc4O35988 Gm24401-201ENSMUST00000157868 91 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm22431-201ENSMUST00000158545 107 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm9593-201ENSMUST00000166034 469 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm23725-201ENSMUST00000177876 107 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Mir691-201ENSMUST00000199719 78 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm17906-201ENSMUST00000202480 901 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm44828-201ENSMUST00000203745 106 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm32300-201ENSMUST00000221735 515 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm24707-201ENSMUST00000082812 107 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm23731-201ENSMUST00000083749 107 ntBASIC0.41□□□□□ -2.34
Sdc4O35988 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Sdc4O35988 Gm13729-201ENSMUST00000120328 406 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Gm11334-201ENSMUST00000121969 156 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Gm22279-201ENSMUST00000157200 93 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Gm22328-201ENSMUST00000158074 112 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Gm3027-201ENSMUST00000167579 451 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Gm27817-201ENSMUST00000184302 233 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Gm28408-201ENSMUST00000191557 463 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.4□□□□□ -2.35
Sdc4O35988 Gm45815-201ENSMUST00000220241 146 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Sdc4O35988 Gm25651-201ENSMUST00000083782 119 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.4□□□□□ -2.35
Sdc4O35988 Gm22545-201ENSMUST00000104350 132 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.39□□□□□ -2.35
Sdc4O35988 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Sdc4O35988 Gm29022-201ENSMUST00000190702 225 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 Gm29490-201ENSMUST00000190923 342 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 Gm37713-201ENSMUST00000191746 198 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 Gm35212-201ENSMUST00000196672 606 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 Gm44135-201ENSMUST00000205221 368 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 Gm24311-201ENSMUST00000082570 104 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 Gm25582-201ENSMUST00000083412 110 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 Gm24490-201ENSMUST00000083803 98 ntBASIC0.39□□□□□ -2.35
Sdc4O35988 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Sdc4O35988 Mir190b-201ENSMUST00000104803 80 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Gm23783-201ENSMUST00000157941 102 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Gm24191-201ENSMUST00000157977 122 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Mir7079-201ENSMUST00000184697 69 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Gm27545-201ENSMUST00000184755 202 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Gm29352-201ENSMUST00000188054 544 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Snord33-201ENSMUST00000083694 84 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Gm22578-201ENSMUST00000083730 107 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Gm26314-201ENSMUST00000083891 107 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.38□□□□□ -2.35
Sdc4O35988 Gm24271-201ENSMUST00000102327 111 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm23203-201ENSMUST00000104374 107 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Mir293-201ENSMUST00000104841 80 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm25317-201ENSMUST00000116824 129 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm14803-201ENSMUST00000117163 361 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.37□□□□□ -2.35
Sdc4O35988 Gm22733-201ENSMUST00000158094 91 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Sdc4O35988 Gm22802-201ENSMUST00000175621 89 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm26501-201ENSMUST00000178307 107 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm36956-201ENSMUST00000193830 214 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm44325-201ENSMUST00000196757 77 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 Gm44282-201ENSMUST00000203199 190 ntBASIC0.37□□□□□ -2.35
Sdc4O35988 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms