Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm23249-201ENSMUST00000083369 161 ntBASIC2.22□□□□□ -2.05
Shisa8J3QNX5 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Shisa8J3QNX5 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.22□□□□□ -2.05
Shisa8J3QNX5 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Shisa8J3QNX5 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Shisa8J3QNX5 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm24670-201ENSMUST00000104154 132 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm11786-201ENSMUST00000120799 155 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm13797-201ENSMUST00000121792 120 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm22281-201ENSMUST00000157198 103 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm25599-201ENSMUST00000157816 103 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm22947-201ENSMUST00000158559 91 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm24053-201ENSMUST00000158620 105 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm23182-201ENSMUST00000158688 135 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Mir669k-201ENSMUST00000177742 127 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm25673-201ENSMUST00000179957 127 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Mir6917-201ENSMUST00000184111 61 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm27753-201ENSMUST00000184742 203 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Mir1291-201ENSMUST00000199842 117 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm34314-201ENSMUST00000203622 367 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm44526-201ENSMUST00000204664 121 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm44555-201ENSMUST00000209008 148 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm22249-201ENSMUST00000082485 136 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm25796-201ENSMUST00000082645 163 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm26494-201ENSMUST00000083154 143 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Snora34-201ENSMUST00000083402 138 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm24493-201ENSMUST00000083805 143 ntBASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Shisa8J3QNX5 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm12143-201ENSMUST00000119666 332 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm13862-201ENSMUST00000121220 197 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm23324-201ENSMUST00000157421 131 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm23642-201ENSMUST00000157858 258 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm25494-201ENSMUST00000158143 100 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm24001-201ENSMUST00000158463 85 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm22527-201ENSMUST00000158816 106 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm37037-201ENSMUST00000194475 424 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm44476-201ENSMUST00000196225 91 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm26126-201ENSMUST00000083188 164 ntBASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Shisa8J3QNX5 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Mir767-201ENSMUST00000103256 107 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm26022-201ENSMUST00000158663 108 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm25476-201ENSMUST00000175125 185 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm24573-201ENSMUST00000175499 112 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm25933-201ENSMUST00000178943 108 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm33866-201ENSMUST00000196911 289 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm43264-201ENSMUST00000202284 325 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm45116-201ENSMUST00000207392 275 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm24313-201ENSMUST00000082561 133 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.19□□□□□ -2.06
Shisa8J3QNX5 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm25915-201ENSMUST00000104265 126 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm12513-201ENSMUST00000118617 352 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm12926-201ENSMUST00000121158 409 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm24480-201ENSMUST00000157442 103 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm25888-201ENSMUST00000157778 302 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm25223-201ENSMUST00000158200 110 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm24212-201ENSMUST00000158258 132 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm22606-201ENSMUST00000158290 103 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm26405-201ENSMUST00000158495 100 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm26214-201ENSMUST00000158581 107 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm17161-201ENSMUST00000169187 524 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm27793-201ENSMUST00000183405 76 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm6801-201ENSMUST00000190697 339 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm43676-201ENSMUST00000197532 540 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Mir7232-201ENSMUST00000197929 74 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm43749-201ENSMUST00000199345 352 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm44024-201ENSMUST00000203008 476 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.18□□□□□ -2.06
Shisa8J3QNX5 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm22248-201ENSMUST00000082482 150 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm26493-201ENSMUST00000083155 136 ntBASIC2.18□□□□□ -2.06
Shisa8J3QNX5 Gm26265-201ENSMUST00000083277 135 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 167.3 ms