Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm27522-201ENSMUST00000183949 230 ntBASIC-0.98□□□□□ -2.57
Ccdc180J3QNE4 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.98□□□□□ -2.57
Ccdc180J3QNE4 AC154562.1-201ENSMUST00000226140 966 ntBASIC-0.98□□□□□ -2.57
Ccdc180J3QNE4 Gm16373-201ENSMUST00000129517 303 ntBASIC-0.99□□□□□ -2.57
Ccdc180J3QNE4 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC-0.99□□□□□ -2.57
Ccdc180J3QNE4 Gm22838-201ENSMUST00000158437 99 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm25956-201ENSMUST00000175115 217 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm35843-201ENSMUST00000193716 666 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm32300-201ENSMUST00000221735 515 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm24523-201ENSMUST00000083965 132 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Mir208b-201ENSMUST00000104735 77 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm23792-201ENSMUST00000122557 93 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm25671-201ENSMUST00000178612 105 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm23307-201ENSMUST00000179167 105 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm25286-201ENSMUST00000179790 105 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm44375-201ENSMUST00000196657 150 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 AC153522.1-201ENSMUST00000220047 1090 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm25791-201ENSMUST00000083292 137 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm22738-201ENSMUST00000083440 147 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm25257-201ENSMUST00000083907 110 ntBASIC-1□□□□□ -2.57
Ccdc180J3QNE4 Gm20415-201ENSMUST00000172877 423 ntBASIC-1.01□□□□□ -2.57
Ccdc180J3QNE4 Gm42855-201ENSMUST00000197388 253 ntBASIC-1.01□□□□□ -2.57
Ccdc180J3QNE4 AC164612.2-202ENSMUST00000216314 253 ntBASIC-1.01□□□□□ -2.57
Ccdc180J3QNE4 Gm23939-201ENSMUST00000082880 133 ntBASIC-1.01□□□□□ -2.57
Ccdc180J3QNE4 Gm23650-201ENSMUST00000083355 70 ntBASIC-1.01□□□□□ -2.57
Ccdc180J3QNE4 Gm11334-201ENSMUST00000121969 156 ntBASIC-1.02□□□□□ -2.57
Ccdc180J3QNE4 Gm23317-201ENSMUST00000157999 129 ntBASIC-1.02□□□□□ -2.57
Ccdc180J3QNE4 Mir1961-201ENSMUST00000158643 112 ntBASIC-1.02□□□□□ -2.57
Ccdc180J3QNE4 Gm28418-201ENSMUST00000186179 423 ntBASIC-1.02□□□□□ -2.57
Ccdc180J3QNE4 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC-1.02□□□□□ -2.57
Ccdc180J3QNE4 Gm44948-201ENSMUST00000209050 149 ntBASIC-1.02□□□□□ -2.57
Ccdc180J3QNE4 Gm24977-201ENSMUST00000083106 163 ntBASIC-1.02□□□□□ -2.57
Ccdc180J3QNE4 Gm23483-201ENSMUST00000104179 108 ntBASIC-1.03□□□□□ -2.57
Ccdc180J3QNE4 Gm22595-201ENSMUST00000104250 130 ntBASIC-1.03□□□□□ -2.57
Ccdc180J3QNE4 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-1.03□□□□□ -2.57
Ccdc180J3QNE4 Gm37313-201ENSMUST00000191673 290 ntBASIC-1.03□□□□□ -2.57
Ccdc180J3QNE4 Gm24861-201ENSMUST00000083459 107 ntBASIC-1.03□□□□□ -2.57
Ccdc180J3QNE4 Mir18-201ENSMUST00000083469 96 ntBASIC-1.03□□□□□ -2.57
Ccdc180J3QNE4 Mir374b-201ENSMUST00000102314 95 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm24116-201ENSMUST00000103975 107 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm12433-201ENSMUST00000119659 255 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm24629-201ENSMUST00000122762 89 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Igkv13-82-201ENSMUST00000200308 346 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm45557-201ENSMUST00000210004 1651 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm14566-201ENSMUST00000118915 321 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm14765-201ENSMUST00000121954 326 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm37743-201ENSMUST00000194645 376 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm45247-201ENSMUST00000210757 309 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm45471-201ENSMUST00000211270 281 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 AC158606.1-201ENSMUST00000220078 325 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Snora16a-201ENSMUST00000083163 136 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 Gm25894-201ENSMUST00000083458 75 ntBASIC-1.04□□□□□ -2.58
Ccdc180J3QNE4 n-R5s39-201ENSMUST00000122613 108 ntBASIC-1.05□□□□□ -2.58
Ccdc180J3QNE4 Gm24896-201ENSMUST00000122741 135 ntBASIC-1.05□□□□□ -2.58
Ccdc180J3QNE4 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.05□□□□□ -2.58
Ccdc180J3QNE4 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.05□□□□□ -2.58
Ccdc180J3QNE4 Gm29216-201ENSMUST00000187117 492 ntBASIC-1.05□□□□□ -2.58
Ccdc180J3QNE4 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
Ccdc180J3QNE4 Gm44988-201ENSMUST00000203835 1161 ntBASIC-1.05□□□□□ -2.58
Ccdc180J3QNE4 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
Ccdc180J3QNE4 Gm25136-201ENSMUST00000083253 115 ntBASIC-1.05□□□□□ -2.58
Ccdc180J3QNE4 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC-1.06□□□□□ -2.58
Ccdc180J3QNE4 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
Ccdc180J3QNE4 Gm14677-201ENSMUST00000117866 486 ntBASIC-1.06□□□□□ -2.58
Ccdc180J3QNE4 Gm22098-201ENSMUST00000157930 85 ntBASIC-1.06□□□□□ -2.58
Ccdc180J3QNE4 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC-1.06□□□□□ -2.58
Ccdc180J3QNE4 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
Ccdc180J3QNE4 Gm23989-201ENSMUST00000117030 66 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm23024-201ENSMUST00000158770 292 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm25750-201ENSMUST00000175483 112 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm22252-201ENSMUST00000179316 79 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm24390-201ENSMUST00000179578 62 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 AC101677.1-201ENSMUST00000218590 158 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm11522-201ENSMUST00000120533 176 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm6568-201ENSMUST00000122274 697 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm28412-201ENSMUST00000187243 177 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 AC116460.1-201ENSMUST00000219040 313 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 AC116465.1-201ENSMUST00000220324 235 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm24615-201ENSMUST00000083268 113 ntBASIC-1.07□□□□□ -2.58
Ccdc180J3QNE4 Gm18747-201ENSMUST00000198129 648 ntBASIC-1.08□□□□□ -2.58
Ccdc180J3QNE4 Mir29b-2-201ENSMUST00000083478 81 ntBASIC-1.08□□□□□ -2.58
Ccdc180J3QNE4 Gm14358-201ENSMUST00000118458 403 ntBASIC-1.09□□□□□ -2.58
Ccdc180J3QNE4 n-R5s188-201ENSMUST00000122646 105 ntBASIC-1.09□□□□□ -2.58
Ccdc180J3QNE4 Gm23633-201ENSMUST00000175293 119 ntBASIC-1.09□□□□□ -2.58
Ccdc180J3QNE4 Trbv25-201ENSMUST00000194700 273 ntBASIC-1.09□□□□□ -2.58
Ccdc180J3QNE4 Gm44391-201ENSMUST00000198490 93 ntBASIC-1.09□□□□□ -2.58
Ccdc180J3QNE4 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC-1.09□□□□□ -2.58
Ccdc180J3QNE4 AC154552.7-201ENSMUST00000222824 156 ntBASIC-1.09□□□□□ -2.58
Ccdc180J3QNE4 Snora62-201ENSMUST00000082991 149 ntBASIC-1.09□□□□□ -2.58
Ccdc180J3QNE4 Gm45263-201ENSMUST00000210377 1375 ntBASIC-1.09□□□□□ -2.58
Ccdc180J3QNE4 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.1□□□□□ -2.58
Ccdc180J3QNE4 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC-1.1□□□□□ -2.58
Ccdc180J3QNE4 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC-1.1□□□□□ -2.58
Ccdc180J3QNE4 Gm28439-201ENSMUST00000187714 876 ntBASIC-1.1□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 168.7 ms