Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm11204-201ENSMUST00000122438 147 ntBASIC2.56□□□□□ -2
Ptchd4B9EKX1 Gm24053-201ENSMUST00000158620 105 ntBASIC2.56□□□□□ -2
Ptchd4B9EKX1 Gm28992-201ENSMUST00000190534 139 ntBASIC2.56□□□□□ -2
Ptchd4B9EKX1 Gm6801-201ENSMUST00000190697 339 ntBASIC2.56□□□□□ -2
Ptchd4B9EKX1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.56□□□□□ -2
Ptchd4B9EKX1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.56□□□□□ -2
Ptchd4B9EKX1 Gm44666-201ENSMUST00000208544 391 ntBASIC2.56□□□□□ -2
Ptchd4B9EKX1 Gm25130-201ENSMUST00000082650 156 ntBASIC2.56□□□□□ -2
Ptchd4B9EKX1 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Ptchd4B9EKX1 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.56□□□□□ -2
Ptchd4B9EKX1 Snord72-201ENSMUST00000104549 81 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 Mir344e-201ENSMUST00000104677 66 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 Gm12512-201ENSMUST00000119620 217 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 Gm22416-201ENSMUST00000158590 88 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 Gm25119-201ENSMUST00000158815 88 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 Gm16326-201ENSMUST00000162843 414 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ptchd4B9EKX1 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 Gm23190-201ENSMUST00000180307 64 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 Mir497-201ENSMUST00000200557 84 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ptchd4B9EKX1 Gm44903-201ENSMUST00000206840 130 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.55□□□□□ -2
Ptchd4B9EKX1 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ptchd4B9EKX1 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm24283-201ENSMUST00000104233 107 ntBASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm15536-201ENSMUST00000121411 114 ntBASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm23470-201ENSMUST00000157129 120 ntBASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm23466-201ENSMUST00000157133 106 ntBASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm24304-201ENSMUST00000177635 107 ntBASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm27959-201ENSMUST00000185172 111 ntBASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm29658-201ENSMUST00000185404 230 ntBASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm44352-201ENSMUST00000196358 110 ntBASIC2.54□□□□□ -2
Ptchd4B9EKX1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm22972-201ENSMUST00000083297 131 ntBASIC2.54□□□□□ -2
Ptchd4B9EKX1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Ptchd4B9EKX1 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ptchd4B9EKX1 Gm24598-201ENSMUST00000122510 74 ntBASIC2.53□□□□□ -2
Ptchd4B9EKX1 Gm26026-201ENSMUST00000122726 123 ntBASIC2.53□□□□□ -2
Ptchd4B9EKX1 Gm23599-201ENSMUST00000157261 251 ntBASIC2.53□□□□□ -2
Ptchd4B9EKX1 Mir6405-201ENSMUST00000184584 124 ntBASIC2.53□□□□□ -2
Ptchd4B9EKX1 Gm44482-201ENSMUST00000199232 103 ntBASIC2.53□□□□□ -2
Ptchd4B9EKX1 Gm44182-201ENSMUST00000204052 115 ntBASIC2.53□□□□□ -2
Ptchd4B9EKX1 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm26279-201ENSMUST00000157095 102 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm24440-201ENSMUST00000157236 63 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm24512-201ENSMUST00000174963 65 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm27476-201ENSMUST00000183366 104 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm29014-201ENSMUST00000191422 326 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm37377-201ENSMUST00000191733 304 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm43587-201ENSMUST00000199590 204 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm44563-201ENSMUST00000207958 178 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm19118-201ENSMUST00000222554 98 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm11351-202ENSMUST00000225724 478 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm25124-201ENSMUST00000083345 164 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Gm22744-201ENSMUST00000083444 65 ntBASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.52□□□□□ -2.01
Ptchd4B9EKX1 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm26135-201ENSMUST00000101993 72 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm24683-201ENSMUST00000104840 88 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm13433-201ENSMUST00000121701 240 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm24937-201ENSMUST00000122597 134 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm24436-201ENSMUST00000157889 302 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm22483-201ENSMUST00000157986 274 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm16584-201ENSMUST00000159267 189 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Snord50b-201ENSMUST00000178497 72 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm44564-201ENSMUST00000207985 180 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ptchd4B9EKX1 Gm25783-201ENSMUST00000122525 190 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Mir1967-201ENSMUST00000157789 82 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Gm23858-201ENSMUST00000158384 106 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Gm25015-201ENSMUST00000158400 128 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Gm17161-201ENSMUST00000169187 524 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Gm22858-201ENSMUST00000174972 76 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Gm45445-201ENSMUST00000209586 232 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ptchd4B9EKX1 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 180.2 ms