Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Ccdc9bA3KGF9 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Ccdc9bA3KGF9 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.09□□□□□ -1.92
Ccdc9bA3KGF9 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc9bA3KGF9 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc9bA3KGF9 Gm27934-201ENSMUST00000158795 63 ntBASIC3.08□□□□□ -1.92
Ccdc9bA3KGF9 Gm23197-201ENSMUST00000158809 112 ntBASIC3.08□□□□□ -1.92
Ccdc9bA3KGF9 Gm26157-201ENSMUST00000158974 126 ntBASIC3.08□□□□□ -1.92
Ccdc9bA3KGF9 Gm20438-201ENSMUST00000174441 329 ntBASIC3.08□□□□□ -1.92
Ccdc9bA3KGF9 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc9bA3KGF9 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc9bA3KGF9 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.07□□□□□ -1.92
Ccdc9bA3KGF9 Gm24118-201ENSMUST00000103972 126 ntBASIC3.07□□□□□ -1.92
Ccdc9bA3KGF9 Gm37428-201ENSMUST00000193886 137 ntBASIC3.07□□□□□ -1.92
Ccdc9bA3KGF9 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.07□□□□□ -1.92
Ccdc9bA3KGF9 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.07□□□□□ -1.92
Ccdc9bA3KGF9 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.07□□□□□ -1.92
Ccdc9bA3KGF9 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc9bA3KGF9 Gm24390-201ENSMUST00000179578 62 ntBASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 Gm28030-201ENSMUST00000184987 138 ntBASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 Gm38298-201ENSMUST00000193578 118 ntBASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 Gm44223-201ENSMUST00000204854 114 ntBASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 Snord61-201ENSMUST00000083176 71 ntBASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 Gm25124-201ENSMUST00000083345 164 ntBASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.06□□□□□ -1.92
Ccdc9bA3KGF9 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Gm26145-201ENSMUST00000104476 127 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Mir291a-201ENSMUST00000104815 82 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Gm25539-201ENSMUST00000116886 122 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Gm23791-201ENSMUST00000122553 293 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Gm25323-201ENSMUST00000122555 103 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Gm17117-201ENSMUST00000163665 299 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Gm44320-201ENSMUST00000199276 86 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.05□□□□□ -1.92
Ccdc9bA3KGF9 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Snord100-201ENSMUST00000116836 74 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm5762-201ENSMUST00000119204 258 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm16021-201ENSMUST00000121176 219 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm12858-201ENSMUST00000121913 208 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm22034-201ENSMUST00000157283 134 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm23668-201ENSMUST00000157465 111 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm23043-201ENSMUST00000157890 109 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm25373-201ENSMUST00000158156 115 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm25491-201ENSMUST00000158733 308 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm43381-201ENSMUST00000198553 165 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm43932-201ENSMUST00000204499 52 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm22738-201ENSMUST00000083440 147 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc9bA3KGF9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm22003-201ENSMUST00000101885 107 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm14811-201ENSMUST00000117070 117 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm25825-201ENSMUST00000157091 124 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm23592-201ENSMUST00000157859 117 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm22756-201ENSMUST00000180118 107 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm29604-201ENSMUST00000187176 163 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm44976-201ENSMUST00000205543 261 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm9370-201ENSMUST00000222787 609 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm25797-201ENSMUST00000082640 107 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm26054-201ENSMUST00000083037 107 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Gm24492-201ENSMUST00000083798 107 ntBASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc9bA3KGF9 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
Ccdc9bA3KGF9 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.03□□□□□ -1.93
Ccdc9bA3KGF9 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm25089-201ENSMUST00000102015 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Mir5127-201ENSMUST00000175295 71 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm25840-201ENSMUST00000177821 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm24952-201ENSMUST00000177909 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm23682-201ENSMUST00000178146 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm24652-201ENSMUST00000178223 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm22629-201ENSMUST00000178272 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm24021-201ENSMUST00000178435 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm22274-201ENSMUST00000178441 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm22050-201ENSMUST00000178442 79 ntBASIC3.02□□□□□ -1.93
Ccdc9bA3KGF9 Gm23688-201ENSMUST00000178502 79 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms