Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm22021-201ENSMUST00000104353 107 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm14882-201ENSMUST00000117216 218 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm14906-201ENSMUST00000119265 390 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm14782-201ENSMUST00000120151 195 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm22598-201ENSMUST00000157600 127 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm26435-201ENSMUST00000179026 107 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm24638-201ENSMUST00000179807 132 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm17067-202ENSMUST00000180131 123 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm26968-201ENSMUST00000182894 481 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm27271-201ENSMUST00000183509 170 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm45456-201ENSMUST00000210841 243 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm24625-201ENSMUST00000082622 130 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Gm26329-201ENSMUST00000093723 110 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CtcflA2APF3 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.25□□□□□ -2.21
CtcflA2APF3 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm9059-201ENSMUST00000118319 183 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm13992-201ENSMUST00000120558 156 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm12785-201ENSMUST00000122052 172 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm26150-201ENSMUST00000157426 151 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm23779-201ENSMUST00000157938 64 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm25371-201ENSMUST00000158162 101 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm24076-201ENSMUST00000158179 94 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm22945-201ENSMUST00000158557 157 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm23289-201ENSMUST00000175615 108 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm27793-201ENSMUST00000183405 76 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm9156-201ENSMUST00000189660 463 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Mir320-201ENSMUST00000083594 82 ntBASIC1.24□□□□□ -2.21
CtcflA2APF3 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
CtcflA2APF3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
CtcflA2APF3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm22032-201ENSMUST00000116946 116 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm14307-201ENSMUST00000118930 291 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm14297-201ENSMUST00000129110 291 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm16362-201ENSMUST00000135189 214 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm16358-201ENSMUST00000146046 210 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm23170-201ENSMUST00000157158 106 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm24851-201ENSMUST00000158028 103 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm23854-201ENSMUST00000158378 108 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Rnu7-201ENSMUST00000158458 62 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm26405-201ENSMUST00000158495 100 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm22075-201ENSMUST00000158599 192 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Mir6388-201ENSMUST00000184417 75 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm37313-201ENSMUST00000191673 290 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm37713-201ENSMUST00000191746 198 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm43250-201ENSMUST00000196536 273 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Mir7661-201ENSMUST00000197023 61 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm43035-201ENSMUST00000197626 517 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm20144-201ENSMUST00000203031 165 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm46997-201ENSMUST00000222108 217 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CtcflA2APF3 Snord118-201ENSMUST00000082965 135 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm24536-201ENSMUST00000083144 107 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 BC022960-201ENSMUST00000119987 1815 ntBASIC1.23□□□□□ -2.21
CtcflA2APF3 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm26255-201ENSMUST00000122492 103 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm8121-201ENSMUST00000153583 499 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm22281-201ENSMUST00000157198 103 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm22099-201ENSMUST00000157925 123 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm17052-201ENSMUST00000165496 289 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm28408-201ENSMUST00000191557 463 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm37338-201ENSMUST00000191986 127 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CtcflA2APF3 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.22□□□□□ -2.21
CtcflA2APF3 AC154747.1-201ENSMUST00000225265 239 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm23625-201ENSMUST00000082457 100 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
CtcflA2APF3 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.22□□□□□ -2.21
CtcflA2APF3 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms