Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm29147-201ENSMUST00000186846 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29118-201ENSMUST00000186908 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28433-201ENSMUST00000187085 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29227-201ENSMUST00000187139 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28759-201ENSMUST00000187621 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28831-201ENSMUST00000187739 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28200-201ENSMUST00000187778 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29034-201ENSMUST00000188099 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28752-201ENSMUST00000188340 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29378-201ENSMUST00000188723 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28569-201ENSMUST00000188748 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28120-201ENSMUST00000188812 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28369-201ENSMUST00000188993 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28537-201ENSMUST00000189026 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28909-201ENSMUST00000189406 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28861-201ENSMUST00000189681 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28717-201ENSMUST00000189950 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29180-201ENSMUST00000190003 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29575-201ENSMUST00000190597 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29631-201ENSMUST00000191065 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28160-201ENSMUST00000191229 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29469-201ENSMUST00000191448 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm37129-201ENSMUST00000195791 315 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm20144-201ENSMUST00000203031 165 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm22980-201ENSMUST00000082608 70 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm23245-201ENSMUST00000083370 135 ntBASIC0.95□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm26080-201ENSMUST00000104069 131 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm25938-201ENSMUST00000104139 166 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm15214-201ENSMUST00000122155 470 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm22447-201ENSMUST00000158155 92 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm22537-201ENSMUST00000158172 199 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm17067-202ENSMUST00000180131 123 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm27898-201ENSMUST00000183987 80 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm19123-201ENSMUST00000190716 651 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm42774-201ENSMUST00000198854 283 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm10092-201ENSMUST00000077110 180 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Snord14a-201ENSMUST00000082807 87 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm24355-201ENSMUST00000082858 122 ntBASIC0.94□□□□□ -2.26
Trbv1A0A0B4J1G7 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm25773-201ENSMUST00000116718 127 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm25805-201ENSMUST00000122788 108 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm22164-201ENSMUST00000158413 106 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28409-201ENSMUST00000187064 103 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28992-201ENSMUST00000190534 139 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm37918-201ENSMUST00000192071 120 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm43472-201ENSMUST00000200175 154 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm25409-201ENSMUST00000083764 131 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.93□□□□□ -2.26
Trbv1A0A0B4J1G7 Mir544-201ENSMUST00000103813 78 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm22935-201ENSMUST00000103960 104 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm11798-201ENSMUST00000119150 421 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm14922-201ENSMUST00000121131 163 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm24915-201ENSMUST00000157288 78 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Mir1967-201ENSMUST00000157789 82 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm2962-201ENSMUST00000159266 336 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm10105-201ENSMUST00000184601 270 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm37089-201ENSMUST00000195616 129 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm42622-201ENSMUST00000197229 355 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm43220-201ENSMUST00000199299 282 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm19855-201ENSMUST00000210145 249 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.92□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm12512-201ENSMUST00000119620 217 ntBASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm20257-202ENSMUST00000188643 130 ntBASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm44811-201ENSMUST00000209120 228 ntBASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.91□□□□□ -2.26
Trbv1A0A0B4J1G7 Gm24966-201ENSMUST00000082443 79 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms