Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm23015-201ENSMUST00000104145 128 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Mir875-201ENSMUST00000104698 78 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm25279-201ENSMUST00000122608 133 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm22221-201ENSMUST00000157362 103 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm24847-201ENSMUST00000158032 108 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Mir3092-201ENSMUST00000174954 96 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm26435-201ENSMUST00000179026 107 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm24390-201ENSMUST00000179578 62 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm18546-201ENSMUST00000197245 676 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm42960-201ENSMUST00000202160 241 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm45543-201ENSMUST00000209327 88 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm11351-202ENSMUST00000225724 478 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm5899-201ENSMUST00000071770 270 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm25788-201ENSMUST00000082721 131 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm22571-201ENSMUST00000082984 70 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm24044-201ENSMUST00000083107 156 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm26497-201ENSMUST00000083146 107 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm23451-201ENSMUST00000083328 122 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Mir93-201ENSMUST00000083593 88 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
Trav1A0A075B5Z4 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Gm11388-201ENSMUST00000120908 159 ntBASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Gm8121-201ENSMUST00000153583 499 ntBASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Mir7679-201ENSMUST00000183379 63 ntBASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Gm46997-201ENSMUST00000222108 217 ntBASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Gm24625-201ENSMUST00000082622 130 ntBASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Gm22299-201ENSMUST00000082663 136 ntBASIC1.56□□□□□ -2.16
Trav1A0A075B5Z4 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm25421-201ENSMUST00000104218 164 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm25111-201ENSMUST00000116686 147 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm24590-201ENSMUST00000116699 119 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm23109-201ENSMUST00000116867 126 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm12143-201ENSMUST00000119666 332 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm22338-201ENSMUST00000157715 129 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm17052-201ENSMUST00000165496 289 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm23090-201ENSMUST00000177331 78 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm27248-201ENSMUST00000184004 166 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm27747-201ENSMUST00000184707 85 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm28453-203ENSMUST00000187041 189 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm28849-201ENSMUST00000188127 174 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm29140-201ENSMUST00000190187 476 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm28330-201ENSMUST00000190353 171 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm28992-201ENSMUST00000190534 139 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Mir465d-201ENSMUST00000196314 58 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm42834-201ENSMUST00000196845 256 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Gm24164-201ENSMUST00000093663 104 ntBASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trav1A0A075B5Z4 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm25875-201ENSMUST00000104323 107 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm26479-201ENSMUST00000122620 106 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm22027-201ENSMUST00000122737 127 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm22883-201ENSMUST00000157376 106 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm26024-201ENSMUST00000158657 322 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm25368-201ENSMUST00000158847 131 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Mir6351-201ENSMUST00000183826 99 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm27332-201ENSMUST00000184893 112 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm38019-201ENSMUST00000195133 380 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm24615-201ENSMUST00000083268 113 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm10222-201ENSMUST00000088336 294 ntBASIC1.54□□□□□ -2.16
Trav1A0A075B5Z4 Gm6444-201ENSMUST00000119611 458 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm14883-201ENSMUST00000120179 157 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm22984-201ENSMUST00000122751 122 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm25392-201ENSMUST00000157335 297 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm26181-201ENSMUST00000157687 106 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm23640-201ENSMUST00000157860 104 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Mir669n-201ENSMUST00000158636 54 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm24174-201ENSMUST00000158933 111 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm24333-201ENSMUST00000175101 84 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm28383-201ENSMUST00000187563 139 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm29262-201ENSMUST00000190084 196 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm37557-201ENSMUST00000191640 139 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm44256-201ENSMUST00000203304 335 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm44959-201ENSMUST00000209127 231 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm26493-201ENSMUST00000083155 136 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Mir300-201ENSMUST00000083485 79 ntBASIC1.53□□□□□ -2.16
Trav1A0A075B5Z4 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms