Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm46993-201ENSMUST00000220708 259 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
H2afb3S4R1G7 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Snora36b-201ENSMUST00000104383 132 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm22193-201ENSMUST00000116868 76 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm12926-201ENSMUST00000121158 409 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm25280-201ENSMUST00000157269 101 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm24436-201ENSMUST00000157889 302 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm26005-201ENSMUST00000158802 134 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm28169-201ENSMUST00000190342 345 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm37918-201ENSMUST00000192071 120 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm38183-201ENSMUST00000193189 205 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm25813-201ENSMUST00000082748 191 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm26265-201ENSMUST00000083277 135 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm24453-201ENSMUST00000083346 76 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Mir302d-201ENSMUST00000083513 66 ntBASIC2.33□□□□□ -2.04
H2afb3S4R1G7 Gm26018-201ENSMUST00000104406 128 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm23990-201ENSMUST00000117031 117 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm14748-201ENSMUST00000119819 411 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm13797-201ENSMUST00000121792 120 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm22281-201ENSMUST00000157198 103 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm22141-201ENSMUST00000157403 277 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm24015-201ENSMUST00000157725 232 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm23350-201ENSMUST00000158429 103 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm24001-201ENSMUST00000158463 85 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm25476-201ENSMUST00000175125 185 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm20718-201ENSMUST00000176058 259 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Mir669k-201ENSMUST00000177742 127 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm25935-201ENSMUST00000178746 107 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm25673-201ENSMUST00000179957 127 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm37104-201ENSMUST00000193278 196 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm37997-201ENSMUST00000193515 267 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm34314-201ENSMUST00000203622 367 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
H2afb3S4R1G7 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm23128-201ENSMUST00000104257 132 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm22792-201ENSMUST00000157225 133 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm24480-201ENSMUST00000157442 103 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm20613-201ENSMUST00000175828 345 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm23128-202ENSMUST00000196578 133 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm43676-201ENSMUST00000197532 540 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm44024-201ENSMUST00000203008 476 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm22248-201ENSMUST00000082482 150 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm25204-201ENSMUST00000082843 106 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Gm22421-201ENSMUST00000083058 107 ntBASIC2.31□□□□□ -2.04
H2afb3S4R1G7 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
H2afb3S4R1G7 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm22270-201ENSMUST00000104034 132 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm14973-201ENSMUST00000117248 255 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm12143-201ENSMUST00000119666 332 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm25599-201ENSMUST00000157816 103 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm23223-201ENSMUST00000158119 127 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm25494-201ENSMUST00000158143 100 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm28344-201ENSMUST00000185704 279 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Mir1291-201ENSMUST00000199842 117 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Snora34-201ENSMUST00000083402 138 ntBASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.3□□□□□ -2.04
H2afb3S4R1G7 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
H2afb3S4R1G7 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm22488-201ENSMUST00000116811 127 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm12513-201ENSMUST00000118617 352 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm22075-201ENSMUST00000158599 192 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm23182-201ENSMUST00000158688 135 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm17161-201ENSMUST00000169187 524 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm34139-201ENSMUST00000196166 294 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm33866-201ENSMUST00000196911 289 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm45116-201ENSMUST00000207392 275 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm30534-201ENSMUST00000217928 207 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm22299-201ENSMUST00000082663 136 ntBASIC2.29□□□□□ -2.04
H2afb3S4R1G7 Gm25634-201ENSMUST00000082667 105 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms