Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm25381-201ENSMUST00000102078 109 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Gm25115-201ENSMUST00000157187 140 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Gm22727-201ENSMUST00000158090 116 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Gm44482-201ENSMUST00000199232 103 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Mir497-201ENSMUST00000200557 84 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Gm23423-201ENSMUST00000082782 106 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Gm22294-201ENSMUST00000083308 104 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Gm25124-201ENSMUST00000083345 164 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Mir300-201ENSMUST00000083485 79 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.81□□□□□ -2.12
H2afb1S4R1E0 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Gm14883-201ENSMUST00000120179 157 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Gm14709-201ENSMUST00000121225 304 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Gm24783-201ENSMUST00000157639 100 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Gm22535-201ENSMUST00000158174 119 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Gm7958-201ENSMUST00000178255 468 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Gm7950-201ENSMUST00000179633 468 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
H2afb1S4R1E0 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Gm7214-201ENSMUST00000222428 272 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 mt-Td-201ENSMUST00000082404 70 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Mir222-201ENSMUST00000083537 79 ntBASIC1.8□□□□□ -2.12
H2afb1S4R1E0 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.8□□□□□ -2.12
H2afb1S4R1E0 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm12926-201ENSMUST00000121158 409 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm15986-201ENSMUST00000122153 400 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Mir1936-201ENSMUST00000158699 93 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm27399-201ENSMUST00000184250 78 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm37763-201ENSMUST00000193445 120 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm44409-201ENSMUST00000198810 166 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm42807-201ENSMUST00000200141 329 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Mir340-201ENSMUST00000083483 98 ntBASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
H2afb1S4R1E0 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Gm25875-201ENSMUST00000104323 107 ntBASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Gm11786-201ENSMUST00000120799 155 ntBASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Gm26200-201ENSMUST00000180273 79 ntBASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Gm27722-201ENSMUST00000183908 76 ntBASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Mir6950-201ENSMUST00000184438 73 ntBASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Gm45754-201ENSMUST00000212380 279 ntBASIC1.78□□□□□ -2.12
H2afb1S4R1E0 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
H2afb1S4R1E0 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm25421-201ENSMUST00000104218 164 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Mir669g-201ENSMUST00000116809 123 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm25664-201ENSMUST00000157697 107 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm23640-201ENSMUST00000157860 104 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm22258-201ENSMUST00000177645 94 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm26032-201ENSMUST00000178535 94 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm25210-201ENSMUST00000178813 94 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm25157-201ENSMUST00000178914 94 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm22046-201ENSMUST00000179027 94 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm23860-201ENSMUST00000179446 132 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm22941-201ENSMUST00000179630 94 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm25471-201ENSMUST00000180126 94 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm42672-201ENSMUST00000197821 352 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm43220-201ENSMUST00000199299 282 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.77□□□□□ -2.13
H2afb1S4R1E0 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm25141-201ENSMUST00000083177 107 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm25789-201ENSMUST00000083294 76 ntBASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
H2afb1S4R1E0 Gm25094-201ENSMUST00000103992 131 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm14792-201ENSMUST00000119725 258 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm14922-201ENSMUST00000121131 163 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm25113-201ENSMUST00000157185 143 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm23858-201ENSMUST00000158384 106 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm26157-201ENSMUST00000158974 126 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm22951-201ENSMUST00000179471 107 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm26092-201ENSMUST00000179798 97 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm27878-201ENSMUST00000184000 106 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm28453-203ENSMUST00000187041 189 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm44477-201ENSMUST00000199661 110 ntBASIC1.76□□□□□ -2.13
H2afb1S4R1E0 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.76□□□□□ -2.13
H2afb1S4R1E0 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms